Man pages for bennop/clusterLUTs
Color lookup ables for use with hierarchical clustering
| between | between test |
| colmat2lutfile | Write color matrix to LUT file |
| ColorShadeRamp | Create a color ramp function with shades of input |
| color.shades | create color shades |
| col.rep | color repetition |
| concat.tbl.list | Concatenate a list of tables |
| cutshades | prepare shades and reorder to match cut |
| default.cuts | default cuts |
| default.hcl | HCL-based rainbow |
| default.lab | Lab-based rainbow |
| default.rgb | RGB-based rainbow |
| dend.with.cuts | show dendrogram with cut levels overlaid |
| dummy.tree | dummy tree data for examples |
| expand.colmat | expand color matrix |
| grapes-and-grapes | binary bitwise AND |
| hri.plot | hue range init plot |
| hue.range.colors | convert hue range matrix to corresponding colors |
| hue.range.init | hue range initialization |
| hue.range.lines | plot hue range |
| hue.range.split | Split a hue range according to 'split.tbl' |
| init.blank.plot | blank plot |
| init.huerange.plot | initialize hue range plot |
| mat2list | matrix to list |
| rainbow_lab | rainbow via Lab-based colorRamp |
| rainbow_lab_ramp | LAB-based Rainbow colorramp function |
| randomize.cutree | randomize cluster assignments |
| readlut | read lookup table |
| read.tree | read cluster tree information as obtained through Matlab |
| reidx.cut | re-index cut(ree) vector |
| show.brain.lut | show brain lookup table |
| show.colmat | show color matrix |
| show.cut | show cuts |
| show.hue.range | Show hue range colors |
| show.lut | show LUT ([color] lookup table) |
| show.shades | Show shading in histogram-style plot |
| show.sub.tables | show sub tables |
| subtables | subtables |
| tbl2mat | table to matrix |
| treeluts | LUT generation for hierarchical clustering tree |
| tree.ranges | full hue range set for cutree |
| tree.ranges.plot | plot hues for a 'tree.ranges' result |
| vec2hsv | Vector to HSV conversion |
| vec2rgb | convert 3-element RGB-vector to color |
| vlevels | vector levels |
| writelut | write LUT |
