API for benyitew/BSampseq
Analysis of BS targeted amplicon sequencing
| Global functions | |
|---|---|
| .findSheetsWAmps | Source code Source code |
| .read.xlsx.allsheets | Source code Source code |
| CpGManifest2GRanges | Source code |
| addStrandFromBSGRanges | Source code |
| batchBSampseq | Source code |
| batchprocessBSAmpSeq | Source code |
| batchstdcurveBSampseq | Source code |
| bs_plotAllStdCurve | Source code |
| bs_plotStdCurve | Source code |
| bs_stdcurveBSampseq | Source code |
| bsseq2ampseqreport | Source code |
| createCpgManifest | Source code |
| findManifest | Source code |
| findReports | Source code |
| getCovgFromCpgManifest | Source code |
| getMethFromCpgManifest | Source code |
| guessStdBetas | Source code |
| loadbsseqBSAmpSeq | Source code |
| plotAllStdCurve | Source code |
| plotStdCurve | Source code |
| processBSampseq | Source code |
| stdcurveBSampseq | Source code |
| summarizeAmpliconByName | Source code |
| summarizeAmpliconBypData | Source code |
