Files in bergerm1/GenomeDerivedDiagnosis
Identify Cancer Type using IMPACT Data only
DESCRIPTION
MolecularDiagnosis.Rproj
NAMESPACE
R/GDDmetrics.R
R/feature_categories.R
R/file_functions.R
R/generate_feature_table.R
R/predict_new.R
R/train_classifier.R
README.md
data-raw/preprocess_data.R
data/Cytoband_Table.rda
data/SelectedSVs.rda
data/cancertypes.rda
data/msk_impact_341.rda
data/rfcal.rda
inst/example_data/msk_impact_2017.zip
inst/extdata/data_CNA.rds
inst/extdata/data_clinical_patient.txt
inst/extdata/data_clinical_sample.txt
inst/extdata/data_fusions.rds
inst/extdata/data_mutations_uniprot.rds
inst/extdata/msk_impact_2017_data_cna_hg19_seg.rds
inst/extdata/tumor_types.txt
inst/extdata/tuneGrid.txt
man/GDDmetrics.Rd
man/broad_cn.Rd
man/cn_burden.Rd
man/focal_cn_portal.Rd
man/fusions.Rd
man/generate_feature_table.Rd
man/hotspot_list.Rd
man/hotspots.Rd
man/mutation_count.Rd
man/mutations.Rd
man/predict_new.Rd
man/train_classifier.Rd
man/truncating_mutations.Rd
tests/testthat.R
tests/testthat/test_functions.R
