Man pages for bhklab/predictionet
Inference for predictive networks designed for (but not limited to) genomic data
| adj.get.hops | Function to identify all children of a parent |
| adj.remove.cycles | Function to remove cycles that may be present in a directed... |
| data.discretize | Function to discretize data based on user specified cutoffs |
| eval.network | Function computing the f1-score, comparing an inferred... |
| expO.colon.ras | Gene expression, annotations, clinical data and priors for... |
| jorissen.colon.ras | Gene expression, annotations, clinical data and priors for... |
| mcc | Function to compute the Matthews Correlation Coefficient... |
| net2pred | Function fitting a regression model for each gene in the data |
| netinf | Function performing network inference by combining priors and... |
| netinf2gml | Function to create an 'igraph' object and export a network to... |
| netinf.cv | Function performing network inference by combining priors and... |
| netinf.predict | Function to make prediction of a node values given its... |
| predictionet-package | Inference for predictive networks designed for (but not... |
| predictionet.press.statistic | Function computing the press statistic for all target... |
| predictionet.stability.cv | Function inferring networks in cross-validation |
| pred.score | Function computing performance of prediction; methods include... |
