Man pages for bioDS/beter
BEAST Templates in R
| basename_sans_ext | Basename without extension |
| beter_options | Set options for the beter package |
| find_tags | Find moustache tags. |
| format_list | Convert numeric elements in list to string |
| guess_datatype | Guess datatype from sequences |
| guess_number_of_states | Guess the number of states |
| is.empty | Test whether list is null or empty |
| join | join strings |
| list2toml | list to toml |
| merge | Merge two lists |
| mkdir | An utility function with an effect similar to Unix mkdir -p.... |
| parse_config | Recursively parse TOML config First recursively parse any... |
| process_subtemplates | Process TOML subtemplates/subconfigs in the templates block |
| process_template | Process an XML template with TOML config. |
| process_xml_chunks | Process list of xml chunks |
| read_sequences | Read sequences from a file |
| read_sequences_helper | Internal helper functions for reading alignment |
| sequences2xml | Convert sequences to BEAST xml data block. |
| settmpdir | Temporarily set a path to a specific directory. Path is... |
| sort_named_list | Sort named list |
| write_config | Write TOML config |
| write_sequences | Write sequences to a file |
