Man pages for biometry/phenologicalOverlap
Phenological overlap between two event time series
| allpointplot | plots simulation data with samplle size on x-axis |
| BetaData | Creates abundance dataset from beta distribution |
| betadist.crossout | Crosses out days from abundance dataset(s) using a beta... |
| changingn.daypattern | simulates abundance data and calculates overlap for changing... |
| changingn.normaldist | simulates abundance data and calculates overlap for changing... |
| changingn.randomday | simulates abundance data and calculates overlap for changing... |
| changingvar.beta | simulates abundance data and calculates overlap for changing... |
| changingvar.norm | simulates abundance data and calculates overlap for changing... |
| CheckData | checks input data for pdf-estimation and some... |
| CheckHurlbert | checks input data for OLE.hurlbert() |
| CheckProbData | checks input data for EstimatorData() Function |
| checkProbFunc | checks input data for EstimatorData() Function |
| CountsToDrawing | Makes a vector of a abundance dataframe |
| daypattern.crossout | Crosses out days in a pattern from abundance dataset(s) |
| estdist | Fits a Distribution to abundance data |
| EstimatorData | checks and converts input data for Overlap-Estimators |
| FillUp | Fills up abundance data-set |
| funcfromdata | basis to make a function from a dataset |
| getdataframe | converts simulation data to a data.frame |
| getmean | gets mean for overlap measure for simulation dataset |
| getOLdata | extracts data for a single overlap-measure from simulation... |
| kernelest | Runs Kernel Density Estimation for abundance data |
| loglikelihood | Calculates the loglikelihood for an abundance datesset and a... |
| measureplot | saves plots from simulation data |
| normaldist.crossout | Crosses out days from abundance dataset(s) using a normal... |
| normalize | Creates a dataframe of probabilities from abundances data set |
| NormData | Creates abundance dataset |
| NormDataDates | Creates abundance dataset for given time-range |
| OLE | Calculates phenological overlap |
| OLE.asymalpha | calculates the asymmetrical alpha |
| OLE.dissimilarity | calculates the Dissimilarity Index |
| OLE.duration | calculates the duration ratio |
| OLE.horn | calculates Horn's Ro |
| OLE.lloyd | calculates Lloyd's interspecies patchiness |
| OLE.matusita | calculates Matusita's rho |
| OLE.morisita | calculates Morisita's lambda |
| OLE.pianka | calculates Pianka's alpha |
| OLE.productmoment | calculates product-moment correlation coefficient |
| OLE.weitzman | calculates Weitzman's Delta |
| OLE.wmd | calculates a 'weighted mean day' based overlap measure |
| PackageCheck | Checks if Package is already installed |
| plotOLdata | normal plot for simulation data |
| randomday.crossout | Crosses out days randomly from abundance dataset(s) |
| rangeit | Range data between 0 and 1 |
| sameXs | Creates two datasets with same x-values |
| saveallplots | saves plots from simulation data |
| uniform | Fits uniform distribution to abundance data |
| wmd | Calculates the weighted mean day for abundance dataset |
