API for brendanf/spoar
SIMD Partial Order Alignment in R
| Global functions | |
|---|---|
| SpoaAlgo | Man page Source code |
| areSameLength | Source code |
| areSameWidth | Source code |
| checkQuals | Source code |
| checkWeights | Source code |
| isAllPositive | Source code |
| isConformable | Source code |
| isNonnegativeScalarInt | Source code |
| isNonpositiveScalarInt | Source code |
| isPositiveInt | Source code |
| matchXMultipleAlignment | Source code |
| matchXString | Source code |
| requireBiostrings | Source code |
| requireShortRead | Source code |
| spoaAlign | Man page Source code |
| spoaAlign.QualityScaledXStringSet | Man page Source code |
| spoaAlign.ShortRead | Source code |
| spoaAlign.ShortReadQ | Man page Source code |
| spoaAlign.XStringSet | Man page Source code |
| spoaAlign.character | Man page Source code |
| spoaAlign.derep | Man page Source code |
| spoaConsensus | Man page Source code |
| spoaConsensus.QualityScaledXStringSet | Man page Source code |
| spoaConsensus.ShortRead | Man page Source code |
| spoaConsensus.ShortReadQ | Man page Source code |
| spoaConsensus.XStringSet | Man page Source code |
| spoaConsensus.character | Man page Source code |
| spoaConsensus.derep | Man page Source code |
| spoa_align | Source code |
| spoa_align_dblqual | Source code |
| spoa_align_intqual | Source code |
| spoa_consensus | Source code |
| spoa_consensus_dblqual | Source code |
| spoa_consensus_intqual | Source code |
| spoar | Man page |
| spoar-package | Man page |
