Files in briencj/growthPheno
Functional Analysis of Phenotypic Growth Data to Smooth and Extract Traits
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/PVA.v3.r
R/S3methodsDeprecations.r
R/byIndv.r
R/byIndv4Intvl.r
R/byIndv4Times.r
R/calcs.r
R/dataLongi_v10.r
R/growthPhenoUtilities.r
R/traitExtract.r
R/traitSmooth.r
R/traitUtilities.r
README.Rmd
README.html
README.log
README.md
README.tex
data/RicePrepped.dat.rda
data/RiceRaw.dat.rda
data/exampleData.rda
data/tomato.dat.rda
growthPheno.Rproj
inst/News.Rd
inst/extdata/raw19datarow.csv
inst/extdata/rawdata.xlsx
man/GrowthRates.Rd
man/PVA.Rd
man/PVA.data.frame.Rd
man/PVA.matrix.Rd
man/RicePrepped.dat.Rd
man/RiceRaw.dat.Rd
man/WUI.Rd
man/anom.Rd
man/args4chosen_plot.Rd
man/args4chosen_smooth.Rd
man/args4devnboxes_plot.Rd
man/args4meddevn_plot.Rd
man/args4profile_plot.Rd
man/args4smoothing.Rd
man/as.smooths.frame.Rd
man/byIndv4Intvl_GRsAvg.Rd
man/byIndv4Intvl_GRsDiff.Rd
man/byIndv4Intvl_ValueCalc.Rd
man/byIndv4Intvl_WaterUse.Rd
man/byIndv4Times_GRsDiff.Rd
man/byIndv4Times_SplinesGRs.Rd
man/byIndv_ValueCalc.Rd
man/calcLagged.Rd
man/calcTimes.Rd
man/cumulate.Rd
man/designFactors.Rd
man/exampleData.Rd
man/getTimesSubset.Rd
man/growthPheno-deprecated.Rd
man/growthPheno-pkg.Rd
man/importExcel.Rd
man/intervalPVA.data.frame.Rd
man/is.smooths.frame.Rd
man/plotAnom.Rd
man/plotCorrmatrix.Rd
man/plotDeviationsBoxes.Rd
man/plotImagetimes.Rd
man/plotProfiles.Rd
man/plotSmoothsComparison.Rd
man/plotSmoothsDevnBoxplots.Rd
man/plotSmoothsMedianDevns.Rd
man/prepImageData.Rd
man/probeSmooths.Rd
man/rcontrib.Rd
man/rcontrib.data.frame.Rd
man/rcontrib.matrix.Rd
man/smoothSpline.Rd
man/smooths.frame.Rd
man/tomato.dat.Rd
man/traitExtractFeatures.Rd
man/traitSmooth.Rd
man/twoLevelOpcreate.Rd
man/validSmoothsFrame.Rd
tests/testthat.R
tests/testthat/data/0498_Rice_Plett_test.csv
tests/testthat/data/area.dat.rda
tests/testthat/data/cart.dat.rda
tests/testthat/data/chkpeadat.rda
tests/testthat/data/dat1.rda
tests/testthat/data/raw.19.dat.rda
tests/testthat/data/raw.RGB.dat.rda
tests/testthat/data/raw.fluo.dat.rda
tests/testthat/data/raw19datarow.csv
tests/testthat/data/rawFLUOdatarow.csv
tests/testthat/data/rawRGBdatarow.csv
tests/testthat/data/testSpline.rda
tests/testthat/testContGRdiff.r
tests/testthat/testCorrPlot.r
tests/testthat/testGRsDiff.r
tests/testthat/testImportXL.r
tests/testthat/testPVA.r
tests/testthat/testProbeSmooths.r
tests/testthat/testRiceNoPlots.r
tests/testthat/testTomatovignette.r
tests/testthat/testTraitWrappers.r
tests/testthat/testbyIndv4Intvl.R
tests/testthat/testbyIndv4Times.r
tests/testthat/testexampleData.r
tests/testthat/testprepImageData.r
tests/testthat/testsmoothSpline.R
vignettes/Rice.pdf
vignettes/Rice.pdf.asis
vignettes/Tomato.pdf
vignettes/Tomato.pdf.asis
vignettes/growthPheno-manual.pdf
vignettes/growthPheno-manual.pdf.asis
