Files in broadinstitute/infercnvApp
An R shiny app to Infer Copy Number Variation from Single-Cell RNA-Seq Data
DESCRIPTION
LICENSE
NAMESPACE
R/runApp.R
README.md
infercnvApp.Rproj
inst/.DS_Store
inst/shiny/.DS_Store
inst/shiny/adjustByProbThreshold.R
inst/shiny/app.R
inst/shiny/bayesianAnalysisTab.R
inst/shiny/cnvCellProbsTab.R
inst/shiny/createObject.R
inst/shiny/diagnosticPlotTab.R
inst/shiny/hmmAnalysisOutputTab.R
inst/shiny/homePage.R
inst/shiny/infercnvApp.R
inst/shiny/mainAnalysisOutputTab.R
inst/shiny/medianFilterTab.R
inst/shiny/runInfercnv.R
inst/shiny/www/.DS_Store
inst/shiny/www/Bayesian-Network-Latent-Mixture-Model.md
inst/shiny/www/Infercnv-i6-HMM-type.md
inst/shiny/www/Smoothing_methods.md
inst/shiny/www/images/.DS_Store
inst/shiny/www/images/AutocorrellationPlots.png
inst/shiny/www/images/BayesModelGraph.png
inst/shiny/www/images/CNVDensityTrace.png
inst/shiny/www/images/CellDensityTrace.png
inst/shiny/www/images/DifferentThresholds.png
inst/shiny/www/images/GelmanPlot.png
inst/shiny/www/images/InferCNV_procedure.png
inst/shiny/www/images/NormalProbabilities.png
inst/shiny/www/images/PosteriorProbBox.png
inst/shiny/www/images/denoise_dynamic_sd1.5.png
inst/shiny/www/images/denoise_filtering_methods_top.png
inst/shiny/www/images/denoise_hard_filter.png
inst/shiny/www/images/denoise_logistic_sd3.png
inst/shiny/www/images/denoise_logistic_sd3_median_filtered.png
inst/shiny/www/images/denoised_vs_sample_vs_subcluster.png
inst/shiny/www/images/example_ngchm.png
inst/shiny/www/images/glioblastoma.infercnv.png
inst/shiny/www/images/i3HMM_model.png
inst/shiny/www/images/iHMM_emission_formula.png
inst/shiny/www/images/inferCNV_i6HMM_calibration.png
inst/shiny/www/images/infercnv.logo.png
inst/shiny/www/images/infercnv.png
inst/shiny/www/images/infercnv.preliminary.png
inst/shiny/www/images/infercnv_i3HMM_example.png
inst/shiny/www/images/infercnv_i6HMM_model.png
inst/shiny/www/images/melanoma.infercnv.png
inst/shiny/www/images/oligodendroglioma.infercnv.png
inst/shiny/www/images/pediatric_midline_gliomas.png
inst/shiny/www/images/proportion_scaled_dupli_9.png
inst/shiny/www/images/proportion_scaled_loss_1.png
inst/shiny/www/images/proportion_scaled_loss_20.png
inst/shiny/www/images/summaryTable.png
inst/shiny/www/images/tool_bar.png
inst/shiny/www/images/top_loss_2.png
inst/shiny/www/images/top_loss_5.png
inst/shiny/www/inferCNV-HMM-based-CNV-Prediction-Methods.md
inst/shiny/www/infercnv-i3-HMM-type.md
inst/shiny/www/infercnv-tumor-subclusters.md
inst/shiny/www/infercnv.style.css
inst/shiny/www/pageFooter.html
man/infercnvApp.Rd
