Files in brockk/trialr
Clinical Trial Designs in 'rstan'

.Rbuildignore

.github/.gitignore

.github/workflows/R-CMD-check.yaml

.gitignore

.travis.yml

DESCRIPTION

NAMESPACE

NEWS.md R/EffTox.R R/augbin_2t_1a_fit.R R/augbin_fit.R R/binary_prob_success.R R/careful_escalation.R R/crm_codified_dose_logistic.R R/crm_dtps.R R/crm_fit.R R/crm_params.R R/crm_path_analysis.R R/crm_prior_beliefs.R R/crm_process.R R/df_parse_outcomes.R R/dose_finding_fit.R R/dose_finding_path_node.R R/dose_finding_paths.R R/eff_at_dose.R R/efftox_analysis_to_df.R R/efftox_contour_plot.R R/efftox_dtps.R R/efftox_dtps_to_dataframe.R R/efftox_fit.R R/efftox_get_tox.R R/efftox_parameters_demo.R R/efftox_params.R R/efftox_parse_outcomes.R R/efftox_path_analysis.R R/efftox_priors.R R/efftox_process.R R/efftox_simulate.R R/efftox_solve_p.R R/efftox_superiority.R R/efftox_utility.R R/efftox_utility_density_plot.R R/get_efftox_priors.R R/misc.R R/n_at_dose.R R/nbg_fit.R R/parse_dose_finding_outcomes.R R/parse_eff_tox_dose_finding_outcomes.R R/peps2_get_data.R R/peps2_process.R R/prior_predictive_augbin_2t_1a.R R/prob_success.R R/prob_tox_exceeds.R R/ranBin2.R R/rlkjcorr.R R/spread_paths.R R/stan_augbin.R R/stan_augbin_demo.R R/stan_crm.R R/stan_efftox.R R/stan_efftox_demo.R R/stan_hierarchical_response_thall.R R/stan_nbg.R R/stan_peps2.R R/total_weight_at_dose.R R/tox_at_dose.R R/trialr-package.R R/trialr_simulate.R R/weights_at_dose.R README.Rmd README.md Scratch/Control.R

_pkgdown.yml

codecov.yml

configure

configure.win

cran-comments.md

docs/404.html

docs/articles/A200-CRM.html

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docs/articles/A210-CRM-visualisation.html

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docs/articles/A220-CRM-pathways.html

docs/articles/A220-CRM-pathways_files/DiagrammeR-styles-0.2/styles.css

docs/articles/A220-CRM-pathways_files/grViz-binding-1.0.5/grViz.js

docs/articles/A220-CRM-pathways_files/htmlwidgets-1.5.1/htmlwidgets.js

docs/articles/A220-CRM-pathways_files/viz-1.8.2/viz.js

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docs/articles/A260-TITE-CRM.html

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docs/articles/A400-EffTox.html

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docs/reference/as.data.frame.crm_fit.html

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docs/reference/augbin_2t_1a_fit.html

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docs/reference/crm_dtps.html

docs/reference/crm_fit-class.html

docs/reference/crm_params-class.html

docs/reference/crm_path_analysis.html

docs/reference/crm_prior_beliefs.html

docs/reference/crm_process.html

docs/reference/df_parse_outcomes.html

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docs/reference/eff_at_dose.html

docs/reference/efftox_analysis_to_df.html

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docs/reference/efftox_contour_plot.html

docs/reference/efftox_dtps.html

docs/reference/efftox_dtps_to_dataframe.html

docs/reference/efftox_fit-class.html

docs/reference/efftox_get_tox.html

docs/reference/efftox_parameters_demo.html

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docs/reference/efftox_parse_outcomes.html

docs/reference/efftox_path_analysis.html

docs/reference/efftox_priors.html

docs/reference/efftox_process.html

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docs/reference/gather_samples.crm_fit.html

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docs/reference/get_efftox_priors.html

docs/reference/index.html

docs/reference/n_at_dose.html

docs/reference/parse_dose_finding_outcomes.html

docs/reference/parse_eff_tox_dose_finding_outcomes.html

docs/reference/peps2_get_data.html

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docs/reference/plot.crm_fit.html

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docs/reference/predict.augbin_2t_1a_fit.html

docs/reference/print.augbin_fit.html

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docs/reference/print.efftox_fit.html

docs/reference/print.nbg_fit.html

docs/reference/prior_predictive_augbin_2t_1a.html

docs/reference/prob_success.html

docs/reference/prob_tox_exceeds.dose_finding_fit.html

docs/reference/prob_tox_exceeds.html

docs/reference/ranBin2.html

docs/reference/rlkjcorr.html

docs/reference/spread_paths.html

docs/reference/stan_augbin.html

docs/reference/stan_augbin_demo.html

docs/reference/stan_crm.html

docs/reference/stan_efftox.html

docs/reference/stan_efftox_demo.html

docs/reference/stan_hierarchical_response_thall.html

docs/reference/stan_nbg.html

docs/reference/stan_peps2.html

docs/reference/summary.crm_fit.html

docs/reference/summary.efftox_fit.html

docs/reference/total_weight_at_dose.html

docs/reference/tox_at_dose.html

docs/reference/trialr-package.html

docs/reference/trialr_simulate.html

docs/reference/weights_at_dose.html

inst/include/stan_meta_header.hpp

inst/stan/AugBin2T1A.stan

inst/stan/BebopInPeps2.stan

inst/stan/CrmEmpiricNormalPrior.stan

inst/stan/CrmOneParamLogisticGammaPrior.stan

inst/stan/CrmOneParamLogisticNormalPrior.stan

inst/stan/CrmTwoParamLogisticNormalPrior.stan

inst/stan/EffTox.stan

inst/stan/NeuenschwanderTwoParamLogit.stan

inst/stan/ThallHierarchicalBinary.stan

inst/stan/include/license.stan

man/as.data.frame.crm_fit.Rd man/as.data.frame.efftox_fit.Rd man/as.mcmc.list.crm_fit.Rd man/as.mcmc.list.efftox_fit.Rd man/as_tibble.augbin_2t_1a_fit.Rd man/as_tibble.dose_finding_paths.Rd man/augbin_2t_1a_fit.Rd man/augbin_fit.Rd man/binary_prob_success.Rd man/careful_escalation.Rd man/closest_to_target.Rd man/crm_codified_dose_logistic.Rd man/crm_dtps.Rd man/crm_fit-class.Rd man/crm_params-class.Rd man/crm_path_analysis.Rd man/crm_prior_beliefs.Rd man/crm_process.Rd man/df_parse_outcomes.Rd man/dose_finding_fit-class.Rd man/dose_finding_path_node-class.Rd man/eff_at_dose.Rd man/efftox_analysis_to_df.Rd man/efftox_contour_plot.Rd man/efftox_dtps.Rd man/efftox_dtps_to_dataframe.Rd man/efftox_fit-class.Rd man/efftox_get_tox.Rd man/efftox_parameters_demo.Rd man/efftox_params-class.Rd man/efftox_parse_outcomes.Rd man/efftox_path_analysis.Rd man/efftox_priors.Rd man/efftox_process.Rd man/efftox_simulate.Rd man/efftox_solve_p.Rd man/efftox_superiority.Rd man/efftox_utility.Rd man/efftox_utility_density_plot.Rd

man/figures/README-unnamed-chunk-11-1.png

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man/figures/README-unnamed-chunk-15-1.png

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trialr.Rproj

vignettes/.gitignore

vignettes/A200-CRM.Rmd vignettes/A210-CRM-visualisation.Rmd vignettes/A220-CRM-pathways.Rmd vignettes/A250-LevyCaseStudy.Rmd vignettes/A260-TITE-CRM.Rmd vignettes/A300-NeuenschwanderBransonGsponer.Rmd vignettes/A400-EffTox.Rmd

vignettes/A400-EffTox_files/figure-html/unnamed-chunk-5-1.png

vignettes/A400-EffTox_files/figure-html/unnamed-chunk-6-1.png

vignettes/A500-HierarchicalBayesianResponse.Rmd vignettes/A600-BEBOP.Rmd

vignettes/library.bib

brockk/trialr documentation built on Oct. 19, 2023, 1:45 a.m.

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brockk/trialr
Clinical Trial Designs in 'rstan'

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Clinical Trial Designs in 'rstan'

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brockk/trialr Clinical Trial Designs in 'rstan'

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brockk/trialr
Clinical Trial Designs in 'rstan'

Files in brockk/trialr
Clinical Trial Designs in 'rstan'