API for bstaggmartin/backwards-BM-simulator
Evolving Rate Models of Continuous Trait Evolution
| Global functions | |
|---|---|
| %c% | Man page |
| %chains% | Man page |
| %d% | Man page |
| %diagnostics% | Man page |
| %m% | Man page |
| %means% | Man page |
| %q% | Man page |
| %quantiles% | Man page |
| %s% | Man page |
| %select% | Man page |
| .Ops.ls | Source code |
| .add.par.class | Source code |
| .add.sampler.select | Source code |
| .anc.recon | Source code |
| .call.op | Source code |
| .call.select | Source code |
| .check.args | Source code |
| .check.edge.indices | Source code |
| .coerce.to.cov.mat | Source code |
| .coerce.trait.mat | Source code |
| .coerce.trait.se | Source code |
| .coerce.tree | Source code |
| .combine.par | Source code |
| .compatible.dims.check | Source code |
| .cut.prof | Source code |
| .drop.stored.traits | Source code |
| .expand.par | Source code |
| .fix.pts | Source code |
| .get.cuts | Source code |
| .get.lines | Source code |
| .get.par.type | Source code |
| .get.param.names | Source code |
| .get.trans.const | Source code |
| .get.windows | Source code |
| .get.y | Source code |
| .int.chains | Source code |
| .int.diagnostics | Source code |
| .int.drop.tip | Source code |
| .int.means | Source code |
| .int.par.math | Source code |
| .int.quant | Source code |
| .int.quantiles | Source code |
| .is.par | Source code |
| .lin.interp | Source code |
| .make.args.fxn | Source code |
| .make.edge.groups.list | Source code |
| .make.par.3D | Source code |
| .make.param.plot | Source code |
| .make.param.plot.legend | Source code |
| .make.prior.list | Source code |
| .match.arg | Source code |
| .match.type | Source code |
| .param.code | Source code |
| .prep.run | Source code |
| .print.info | Source code |
| .print.main.params | Source code |
| .proc.dim1.mods | Source code |
| .proc.op | Source code |
| .proc.select | Source code |
| .proc.tip | Source code |
| .proc.x | Source code |
| .recyclables | Source code |
| .relab.nodes | Source code |
| .roll.quant | Source code |
| .simplify.par | Source code |
| .strip.par.class | Source code |
| .subset.dim1 | Source code |
| .subset.dim2 | Source code |
| .trim.prof | Source code |
| Math.param_block | Source code |
| Nedge.evorates | Source code |
| Nedge.evorates_fit | Source code |
| Nnode.evorates | Source code |
| Nnode.evorates_fit | Source code |
| Ntip.evorates | Source code |
| Ntip.evorates_fit | Source code |
| Ops.param_block | Source code |
| Summary.param_block | Source code |
| `%c%` | Source code |
| `%chains%` | Source code |
| `%d%` | Source code |
| `%diagnostics%` | Source code |
| `%m%` | Source code |
| `%means%` | Source code |
| `%q%` | Source code |
| `%quantiles%` | Source code |
| `%s%` | Source code |
| `%select%` | Source code |
| `names<-.param_block` | Source code |
| alter.cols | Man page Source code |
| anc.edges | Man page Source code |
| anc.edges.evorates | Source code |
| anc.edges.evorates_fit | Source code |
| anc.edges.phylo | Source code |
| c.param_block | Source code |
| check.ess | Man page Source code |
| check.mix | Man page Source code |
| combine.chains | Man page Source code |
| def.color.scheme | Source code |
| des.edges | Man page Source code |
| des.edges.evorates | Source code |
| des.edges.evorates_fit | Source code |
| des.edges.phylo | Source code |
| drop.tips | Man page Source code |
| drop.tips.evorates | Source code |
| drop.tips.evorates_fit | Source code |
| drop.tips.phylo | Source code |
| edge.ranges | Man page Source code |
| edge.ranges.evorates | Source code |
| edge.ranges.evorates_fit | Source code |
| edge.ranges.phylo | Source code |
| edge.vcv | Source code |
| evorates | Man page |
| exclude.clade | Man page Source code |
| exclude.warmup | Man page Source code |
| fit.evorates | Man page Source code |
| get.R | Man page Source code |
| get.bg.rate | Man page Source code |
| get.clade.edges | Man page Source code |
| get.post.traits | Man page Source code |
| get.sd | Man page Source code |
| input.evorates | Man page Source code |
| ladder | Man page Source code |
| ladder.evorates | Source code |
| ladder.evorates_fit | Source code |
| ladder.phylo | Source code |
| legend.evorates | Source code |
| multi.bind.tip | Source code |
| names.param_block | Source code |
| output.evorates | Man page Source code |
| pairs.evorates | Source code |
| par.c | Man page Source code |
| param_block-class | Man page |
| plot.evorates | Man page Source code |
| plot.evorates_fit | Man page Source code |
| print.evorates_fit | Source code |
| prof.plot | Man page Source code |
| pwc | Man page Source code |
| remove.trend | Man page Source code |
| rnorm.par | Man page Source code |
| root.edges | Man page Source code |
| root.edges.evorates | Source code |
| root.edges.evorates_fit | Source code |
| root.edges.phylo | Source code |
| run.evorates | Man page Source code |
| select.chains | Man page Source code |
| sim.evorates | Man page Source code |
| sis.edges | Man page Source code |
| sis.edges.evorates | Source code |
| sis.edges.evorates_fit | Source code |
| sis.edges.phylo | Source code |
| summary.evorates_fit | Source code |
| thin.chains | Man page Source code |
| tip.edges | Man page Source code |
| tip.edges.evorates | Source code |
| tip.edges.evorates_fit | Source code |
| tip.edges.phylo | Source code |
| trace.plot | Man page Source code |
