| cpDecomposition | Canonical Polyadic Decomposition |
| cpmNormalization | Performs counts per million (CPM) data normalization |
| dRegulation | Evaluates gene differential regulation based on manifold... |
| makeNetworks | Computes gene regulatory networks for subsamples of cells... |
| manifoldAlignment | Performs non-linear manifold alignment of two gene regulatory... |
| pcNet | Computes a gene regulatory network based on principal... |
| scQC | Performs single-cell data quality control |
| scTenifoldNet | scTenifoldNet |
| tensorDecomposition | Performs CANDECOMP/PARAFAC (CP) Tensor Decomposition. |
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