API for calebclass/NanoTube
An Easy Pipeline for NanoString nCounter Data Analysis
| Global functions | |
|---|---|
| ExamplePathways | Man page |
| ExampleResults | Man page |
| NanoTube | Man page |
| deVolcano | Man page Source code |
| fgseaPostprocessing | Man page Source code |
| fgseaPostprocessingXLSX | Man page Source code |
| fgseaToLEdge | Man page Source code |
| gm_mean | Man page Source code |
| groupFGSEA | Man page Source code |
| groupedGSEAtoStackedReport | Man page Source code |
| limmaToFGSEA | Man page Source code |
| makeDiffExprFile | Man page Source code |
| makeFGSEAmasterTable | Man page Source code |
| makeNanoStringSetFromEset | Man page Source code |
| nanostringPCA | Man page Source code |
| negativeQC | Man page Source code |
| normalize_housekeeping | Man page Source code |
| normalize_pos_controls | Man page Source code |
| nsdiffToFGSEA | Man page Source code |
| positiveQC | Man page Source code |
| processNanostringData | Man page Source code |
| read_cpdb_sourceDBs | Man page Source code |
| read_cpdb_tab | Man page Source code |
| read_merge_rcc | Man page Source code |
| read_rcc | Man page Source code |
| read_sampleData | Man page Source code |
| remove_background | Man page Source code |
| runLimmaAnalysis | Man page Source code |
| untar_dirs | Man page Source code |
| unzip_dirs | Man page Source code |
