caravagnalab/ctree: ctree - Clone trees in cancer evolution

This package provides an implementation for clone trees that can be build of Cancer Cell Franctions (CCFs) clusters computed by tumour subclonal deconvolution. This type of models can be used to study the evolutionary trajectories of a tumour from bulk sequencing data. This package provides functions to generate clone trees from the results of subclonal deconvolution analyses, to plot and summarise trees.

install.packages("remotes")
remotes::install_github("caravagnalab/ctree")