API for caravagnalab/ctree
ctree - Clone trees in cancer evolution
| Global functions | |
|---|---|
| .onLoad | Source code |
| CCF_phylogeny_univariate | Source code |
| ClonEvol_surrogate | Source code |
| DataFrameToEdges | Source code |
| DataFrameToMatrix | Source code |
| MatrixToDataFrame | Source code |
| MatrixToEdges | Source code |
| TidyGraphToDataFrame | Source code |
| TidyGraphToMatrix | Source code |
| all.possible.trees | Source code |
| children | Source code |
| computeMI.table | Source code |
| consensusModel | Source code |
| ctree | Man page Source code |
| ctree_input | Man page |
| ctrees | Man page Source code |
| edgesToDataFrame | Source code |
| edgesToMatrix | Source code |
| hashTrees | Source code |
| information_transfer | Source code |
| is_tree | Source code |
| leaves | Source code |
| node.penalty.for.branching | Source code |
| plot.ctree | Man page Source code |
| plot_CCF_clusters | Man page Source code |
| plot_clone_size | Man page Source code |
| plot_icon | Man page Source code |
| plot_information_transfer | Man page Source code |
| print.ctree | Man page Source code |
| pval_subcsz | Source code |
| rankTrees | Source code |
| reach | Source code |
| root | Source code |
| stats.rev_phylo | Source code |
| summary.ctree | Man page Source code |
| trees_sampler | Source code |
| weightMI.byMultinomial | Source code |
| weighted.sampling | Source code |
