Files in casblaauw/phosphocie
Create Continuous Phosphosite Colour Representations
.Rbuildignore
.Rhistory
.gitattributes
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/phosphocie.R
R/read_kinases.R
R/read_phosphosites.R
R/sysdata.rda
R/ucie_transformations.R
R/write_phosphosites.R
_pkgdown.yml
data-raw/create_reference_colourspace.R
data-raw/extract_netphorest_kinases.R
inst/extdata/Kinase_Substrate_Dataset_head
inst/extdata/Phosphorylation_site_dataset_head
inst/extdata/francavilla_netphorest.gz
inst/extdata/francavilla_s3.xlsx
inst/extdata/kinsub_head_netphorest
inst/extdata/phosphosite_head_netphorest
man/build_fastas.Rd
man/filter_netphorest.Rd
man/filter_phosphosites.Rd
man/fit_transform.Rd
man/get_middle_fragment.Rd
man/kinase2cielab.Rd
man/phosphocie.Rd
man/prep_ucie_data.Rd
man/read_kinsub.Rd
man/read_ksp.Rd
man/read_netphorest.Rd
man/read_phosphosite.Rd
man/retrieve_fastas.Rd
man/transform_data.Rd
man/write_ksp_input.Rd
man/write_pwm_input.Rd
phosphocie.Rproj
tests/testthat.R
tests/testthat/test-read_kinases.R
tests/testthat/test-read_phosphosites.R
tests/testthat/test-write_phosphosites.R
vignettes/.gitignore
vignettes/example.Rmd
vignettes/phosphocie.Rmd
