| create_mz_rt_scatter_plots | create mz_rt scatter plot | 
| get_CV | A get_CV function | 
| get_imputated_data | A get_imputated_data function | 
| get_median_vs_running_order | A median_vs_running_order function | 
| get_median_vs_running_order_comparision | A get_median_vs_running_order_comparision function | 
| get_median_vs_SD | create get_median_vs_SD scatter plot | 
| get_metabolites_group_by_PCA | A get_metabolites_group_by_PCA function | 
| get_missingness_vs_running_order | A get_missingness_vs_running_order function | 
| get_missingness_vs_running_order_comparision | A get_missingness_vs_running_order_comparision function | 
| get_plate_effect_by_PCA | A get_plate_effect_by_PCA function | 
| get_waterfall_plots | A get_waterfall_plots function | 
| ICC | An ICC function | 
| make_t_SNE_graph_for_metabolites_group | A make_t_SNE_graph_for_metabolites_group function | 
| make_t_SNE_graph_for_plate_effects | A make_t_SNE_graph_for_plate_effects function | 
| pp_meta_data | pool plasma metabolites reading with plate_well as id | 
| sample_info_data | metabolites information with plate_well as id | 
| sample_meta_data | sample metabolites reading with plate_well as id | 
| sample_trt_data | metabolites information with subjectId and year as id | 
| trt_logit_model | A trt_logit_model function | 
| trt_logit_model_with_age_gender | A trt_logit_model_with_age_gender function | 
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