API for cbg-ethz/SubGroupSeparation
Inference in Bayesian Networks

Global functions
.onLoad	Source code
.onUnload	Source code
Asia	Man page
Asiamat	Man page
BN	Man page Source code
BN,BN-class	Man page
BN-class	Man page
BNDataset	Man page Source code
BNDataset,BNDataset-class	Man page
BNDataset-class	Man page
InferenceEngine	Man page Source code
InferenceEngine,InferenceEngine-class	Man page
InferenceEngine-class	Man page
ProcessResultTableNRMSE	Source code
RowVar	Source code
SGS.end.log	Source code
SGS.log	Source code
SGS.reset.log	Source code
SGS.start.log	Source code
add.observations<-	Man page
add.observations<-,InferenceEngine-method	Man page
approxInference	Man page Source code
belief.propagation	Man page
belief.propagation,InferenceEngine	Man page
belief.propagation,InferenceEngine-method	Man page
benchmark	Source code
benchmarkMultipleNets	Man page Source code
benchmarkStudy	Source code
benchmarkStudyMain	Source code
bn	Man page
bn,InferenceEngine	Man page
bn,InferenceEngine-method	Man page
bn<-	Man page
bn<-,InferenceEngine-method	Man page
bngzplot	Source code
bnqgplot	Source code
boot	Man page
boot,BNDataset	Man page
boot,BNDataset,numeric-method	Man page
boots	Man page
boots,BNDataset	Man page
boots,BNDataset-method	Man page
boots<-	Man page
boots<-,BNDataset-method	Man page
bootstrap	Man page
bootstrap,BNDataset	Man page
bootstrap,BNDataset-method	Man page
build.junction.tree	Man page
build.junction.tree,InferenceEngine	Man page
build.junction.tree,InferenceEngine-method	Man page
calcExactInference	Source code
clique.tree	Source code
complete	Man page
complete,BNDataset	Man page
complete,BNDataset-method	Man page
compute.message	Source code
convertBNBestieToSGS	Man page Source code
convertCPTsBestieToSGS	Man page Source code
counts.to.probs	Source code
cpts	Man page
cpts,BN	Man page
cpts,BN-method	Man page
cpts<-	Man page
cpts<-,BN-method	Man page
dag	Man page
dag,BN	Man page
dag,BN-method	Man page
dag.to.cpdag	Man page Source code
dag<-	Man page
dag<-,BN-method	Man page
data.file	Man page
data.file,BNDataset	Man page
data.file,BNDataset-method	Man page
data.file<-	Man page
data.file<-,BNDataset-method	Man page
directed.to.undirected.graph	Source code
discreteness	Man page
discreteness,BN	Man page
discreteness,BN-method	Man page
discreteness,BNDataset	Man page
discreteness,BNDataset-method	Man page
discreteness<-	Man page
discreteness<-,BN-method	Man page
discreteness<-,BNDataset-method	Man page
divide	Source code
edge.dir.wpdag	Man page
em	Man page
em,InferenceEngine,BNDataset	Man page
em,InferenceEngine,BNDataset-method	Man page
exactInference	Man page Source code
factors.to.graph	Source code Source code
fancy.cpt	Source code
fast.bincombinations	Source code
find.best.network	Source code
find.best.ordering	Source code
g2	Source code
get.allAncestors	Man page Source code
get.allChildren	Source code
get.allMarkovBlanket	Source code
get.allParents	Source code
get.allSubGroups	Man page Source code
get.averageMarkovBlanketSize	Source code
get.most.probable.values	Man page
get.most.probable.values,BN	Man page
get.most.probable.values,BN-method	Man page
get.most.probable.values,InferenceEngine	Man page
get.most.probable.values,InferenceEngine-method	Man page
get.probNode	Source code
get.probNodeMB	Source code
get.probVector	Source code
get.subBN	Source code
get.subGroup	Man page Source code
get.typicalMarkovBlanketSize	Source code
getLoopyGroupCliques	Source code
graph.to.factors	Source code Source code
has.boots	Man page
has.boots,BNDataset	Man page
has.boots,BNDataset-method	Man page
has.imputed.boots	Man page
has.imputed.boots,BNDataset	Man page
has.imputed.boots,BNDataset-method	Man page
has.imputed.data	Man page
has.imputed.data,BNDataset	Man page
has.imputed.data,BNDataset-method	Man page
has.raw.data	Man page
has.raw.data,BNDataset	Man page
has.raw.data,BNDataset-method	Man page
hc	Source code
header.file	Man page
header.file,BNDataset	Man page
header.file,BNDataset-method	Man page
header.file<-	Man page
header.file<-,BNDataset-method	Man page
identify.subgraphs	Source code
imp.boots	Man page
imp.boots,BNDataset	Man page
imp.boots,BNDataset-method	Man page
imp.boots<-	Man page
imp.boots<-,BNDataset-method	Man page
impossible.family.mask	Source code
impute	Man page
impute,BNDataset	Man page
impute,BNDataset-method	Man page
imputed.data	Man page
imputed.data,BNDataset	Man page
imputed.data,BNDataset-method	Man page
imputed.data<-	Man page
imputed.data<-,BNDataset-method	Man page
imputed.log.likelihood	Source code
ind2subv	Source code Source code
initialize,BN-method	Man page
initialize,BNDataset-method	Man page
initialize,InferenceEngine-method	Man page
interventions	Man page
interventions,InferenceEngine	Man page
interventions,InferenceEngine-method	Man page
interventions<-	Man page
interventions<-,InferenceEngine-method	Man page
is.acyclic	Source code
is.integer0	Source code
jpts	Man page
jpts,InferenceEngine	Man page
jpts,InferenceEngine-method	Man page
jpts<-	Man page
jpts<-,InferenceEngine-method	Man page
jt.cliques	Man page
jt.cliques,InferenceEngine	Man page
jt.cliques,InferenceEngine-method	Man page
jt.cliques<-	Man page
jt.cliques<-,InferenceEngine-method	Man page
junction.tree	Man page
junction.tree,InferenceEngine	Man page
junction.tree,InferenceEngine-method	Man page
junction.tree.normConstNormal	Source code
junction.tree<-	Man page
junction.tree<-,InferenceEngine-method	Man page
knn.impute	Man page Source code
label.edges	Source code
layering	Man page
layering,BN	Man page
layering,BN-method	Man page
learn.dynamic.network	Man page
learn.dynamic.network,BN	Man page
learn.dynamic.network,BN-method	Man page
learn.dynamic.network,BNDataset	Man page
learn.dynamic.network,BNDataset-method	Man page
learn.network	Man page
learn.network,BN	Man page
learn.network,BN-method	Man page
learn.network,BNDataset	Man page
learn.network,BNDataset-method	Man page
learn.params	Man page
learn.params,BN,BNDataset	Man page
learn.params,BN,BNDataset-method	Man page
learn.structure	Man page
learn.structure,BN,BNDataset	Man page
learn.structure,BN,BNDataset-method	Man page
learn_bn	Man page Source code
log.lik	Source code
loopy_belief.propagation	Man page
loopy_belief.propagation,InferenceEngine	Man page
loopy_belief.propagation,InferenceEngine-method	Man page
makeAllPlots	Man page Source code
marginalize	Source code
marginals	Man page
marginals,InferenceEngine	Man page
marginals,InferenceEngine-method	Man page
mmpc	Source code
mmpc.bwd	Source code
mmpc.fwd	Source code
moralization	Source code
mult	Source code
name	Man page
name,BN	Man page
name,BN-method	Man page
name,BNDataset	Man page
name,BNDataset-method	Man page
name<-	Man page
name<-,BN-method	Man page
name<-,BNDataset-method	Man page
node.sizes	Man page
node.sizes,BN	Man page
node.sizes,BN-method	Man page
node.sizes,BNDataset	Man page
node.sizes,BNDataset-method	Man page
node.sizes<-	Man page
node.sizes<-,BN-method	Man page
node.sizes<-,BNDataset-method	Man page
num.boots	Man page
num.boots,BNDataset	Man page
num.boots,BNDataset-method	Man page
num.boots<-	Man page
num.boots<-,BNDataset-method	Man page
num.items	Man page
num.items,BNDataset	Man page
num.items,BNDataset-method	Man page
num.items<-	Man page
num.items<-,BNDataset-method	Man page
num.nodes	Man page
num.nodes,BN	Man page
num.nodes,BN-method	Man page
num.nodes,InferenceEngine	Man page
num.nodes,InferenceEngine-method	Man page
num.nodes<-	Man page
num.nodes<-,BN-method	Man page
num.nodes<-,InferenceEngine-method	Man page
num.time.steps	Man page
num.time.steps,BN	Man page
num.time.steps,BN-method	Man page
num.time.steps,BNDataset	Man page
num.time.steps,BNDataset-method	Man page
num.time.steps<-	Man page
num.time.steps<-,BN-method	Man page
num.time.steps<-,BNDataset-method	Man page
num.variables	Man page
num.variables,BNDataset	Man page
num.variables,BNDataset-method	Man page
num.variables<-	Man page
num.variables<-,BNDataset-method	Man page
observations	Man page
observations,InferenceEngine	Man page
observations,InferenceEngine-method	Man page
observations<-	Man page
observations<-,InferenceEngine-method	Man page
order.edges	Source code
parents.to.dag	Source code
plot	Man page
plot,BN	Man page
plot.BN	Man page Source code
plot.BN,BN	Man page
plot.BNwithObs	Source code
plot.BNwithSubGroups	Source code
plot.graph	Source code
plot.normConstCalc	Source code
plot.samplingProgress	Source code
plot_bn	Man page Source code
plot_dag	Man page Source code
print	Man page
print,BN	Man page
print,BNDataset	Man page
print,InferenceEngine	Man page
print.BN	Man page Source code
print.BN,BN	Man page
print.BNDataset	Man page Source code
print.BNDataset,BNDataset	Man page
print.InferenceEngine	Man page Source code
print.InferenceEngine,InferenceEngine	Man page
processAndPlot	Source code
quantiles	Man page
quantiles,BN	Man page
quantiles,BN-method	Man page
quantiles,BNDataset	Man page
quantiles,BNDataset-method	Man page
quantiles.matrix	Source code
quantiles<-	Man page
quantiles<-,BN-method	Man page
quantiles<-,BNDataset-method	Man page
quantize.matrix	Source code
randomBN	Man page Source code
randomObs	Source code
raw.data	Man page
raw.data,BNDataset	Man page
raw.data,BNDataset-method	Man page
raw.data<-	Man page
raw.data<-,BNDataset-method	Man page
read.bif	Man page
read.bif,character	Man page
read.bif,character-method	Man page
read.dataset	Man page
read.dataset,BNDataset,character,character	Man page
read.dataset,BNDataset,character,character-method	Man page
read.dsc	Man page
read.dsc,character	Man page
read.dsc,character-method	Man page
read.net	Man page
read.net,character	Man page
read.net,character-method	Man page
read.scores	Source code
sample.chain	Source code
sample.dataset	Man page
sample.dataset,BN	Man page
sample.dataset,BN-method	Man page
sample.dataset,InferenceEngine	Man page
sample.dataset,InferenceEngine-method	Man page
sample.row	Man page
sample.row,BN	Man page
sample.row,BN-method	Man page
sample.subGroupSampling	Man page Source code
save.scores	Source code
scoring.func	Man page
scoring.func,BN	Man page
scoring.func,BN-method	Man page
scoring.func<-	Man page
scoring.func<-,BN-method	Man page
shd	Man page Source code
show	Man page
show,AllTheClasses-method	Man page
show,BN-method	Man page
show,BNDataset-method	Man page
show,InferenceEngine-method	Man page
sm	Source code
sort.dimensions	Source code
stat.mode	Source code
stat.mode.ord	Source code
strcat	Source code
struct.algo	Man page
struct.algo,BN	Man page
struct.algo,BN-method	Man page
struct.algo<-	Man page
struct.algo<-,BN-method	Man page
subGroupSampling.propagation	Source code
subGroup_belief.propagation	Source code
subGroup_loopyBelief.propagation	Source code
subGroup_loopyBelief.propagation2	Source code
sub_belief.propagation	Man page
test.updated.bn	Man page
test.updated.bn,InferenceEngine	Man page
test.updated.bn,InferenceEngine-method	Man page
topological.sort	Source code
triangulation	Source code
tune.knn.impute	Man page Source code
unique.observations	Source code
updated.bn	Man page
updated.bn,InferenceEngine	Man page
updated.bn,InferenceEngine-method	Man page
updated.bn<-	Man page
updated.bn<-,InferenceEngine-method	Man page
variables	Man page
variables,BN	Man page
variables,BN-method	Man page
variables,BNDataset	Man page
variables,BNDataset-method	Man page
variables<-	Man page
variables<-,BN-method	Man page
variables<-,BNDataset-method	Man page
wpdag	Man page
wpdag,BN	Man page
wpdag,BN-method	Man page
wpdag.from.dag	Man page
wpdag.from.dag,BN	Man page
wpdag.from.dag,BN-method	Man page
wpdag<-	Man page
wpdag<-,BN-method	Man page
write.dsc	Man page
write.dsc,BN	Man page
write.dsc,BN-method	Man page
write_xgmml	Man page
write_xgmml,BN	Man page
write_xgmml,BN-method	Man page