Files in cbg-ethz/SubGroupSeparation
Inference in Bayesian Networks

.Rbuildignore

.github/.gitignore

.github/workflows/pkgdown.yaml

.gitignore

DESCRIPTION

LICENSE

NAMESPACE

NEWS.md

R/.DS_Store

R/AllClasses.R R/AllGenerics.R R/Asiaadj.R R/BN-methods.R R/BNDataset-methods.R R/Conversion_BiDAG_Bestie-methods.R R/InferenceEngine-methods.R R/JunctionTree-methods.R R/SGS.R R/beliefPropagation-methods.R R/benchmark-methods.R R/buildJunctionTree-methods.R R/cpdag.R R/em.R R/imputation.R R/io-methods.R R/io.R R/learn-methods.R R/loopyBeliefPropagation-methods.R R/mmhc.R R/sampling-methods.R R/sem.R R/sm.R R/subGroup-methods.R R/subGroupSampling-methods.R R/util.R ReadMe.md

SGS.Rproj

_pkgdown.yml

application_demo/.DS_Store

application_demo/analysis_results.rds

application_demo/mutation_array_processed.rds

application_demo/mutation_data_analysis.R

application_demo/patient_array_processed.rds

benchmark/.DS_Store

benchmark/benchmark-demonstration.R

benchmark/benchmark_res/.DS_Store

benchmark/figures-demonstration.R

data/Asia.rda

data/Asiamat.rda

docs/404.html

docs/LICENSE-text.html

docs/ReadMe.html

docs/articles/SGS.html

docs/articles/SGS_files/figure-html/unnamed-chunk-2-1.png

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docs/articles/benchmark.png

docs/articles/index.html

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docs/bootstrap-toc.css

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docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/Asia.html

docs/reference/Asiamat.html

docs/reference/BN-class.html

docs/reference/BNDataset-class.html

docs/reference/InferenceEngine-class.html

docs/reference/Rplot001.png

docs/reference/add.observations-set.html

docs/reference/approxInference.html

docs/reference/belief.propagation.html

docs/reference/benchmarkMultipleNets.html

docs/reference/bn-method.html

docs/reference/bn-set.html

docs/reference/boot.html

docs/reference/boots-set.html

docs/reference/boots.html

docs/reference/bootstrap.html

docs/reference/build.junction.tree.html

docs/reference/complete.html

docs/reference/convertBNBestieToSGS.html

docs/reference/convertCPTsBestieToSGS.html

docs/reference/cpts-set.html

docs/reference/cpts.html

docs/reference/dag-set.html

docs/reference/dag.html

docs/reference/dag.to.cpdag.html

docs/reference/data.file-set.html

docs/reference/data.file.html

docs/reference/discreteness-set.html

docs/reference/discreteness.html

docs/reference/edge.dir.wpdag.html

docs/reference/em.html

docs/reference/exactInference.html

docs/reference/get.allAncestors.html

docs/reference/get.allSubGroups.html

docs/reference/get.most.probable.values.html

docs/reference/get.subGroup.html

docs/reference/has.boots.html

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docs/reference/index.html

docs/reference/interventions-set.html

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docs/reference/jpts-set.html

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docs/reference/jt.cliques-set.html

docs/reference/jt.cliques.html

docs/reference/junction.tree-set.html

docs/reference/junction.tree.html

docs/reference/knn.impute.html

docs/reference/layering.html

docs/reference/learn.dynamic.network.html

docs/reference/learn.network.html

docs/reference/learn.params.html

docs/reference/learn.structure.html

docs/reference/learn_bn.html

docs/reference/loopy_belief.propagation.html

docs/reference/makeAllPlots.html

docs/reference/marginals.html

docs/reference/name-set.html

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docs/reference/node.sizes-set.html

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docs/reference/observations-set.html

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docs/reference/plot_bn.html

docs/reference/plot_dag.html

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docs/reference/quantiles-set.html

docs/reference/quantiles.html

docs/reference/randomBN.html

docs/reference/raw.data-set.html

docs/reference/raw.data.html

docs/reference/read.bif.html

docs/reference/read.dataset.html

docs/reference/read.dsc.html

docs/reference/read.net.html

docs/reference/sample.dataset.html

docs/reference/sample.row.html

docs/reference/sample.subGroupSampling.html

docs/reference/scoring.func-set.html

docs/reference/scoring.func.html

docs/reference/shd.html

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docs/reference/struct.algo-set.html

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docs/reference/sub_belief.propagation.html

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docs/reference/updated.bn-set.html

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docs/reference/variables.html

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docs/reference/wpdag.from.dag.html

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docs/reference/write.dsc.html

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docs/sitemap.xml

inst/CITATION

man/Asia.Rd man/Asiamat.Rd man/BN-class.Rd man/BNDataset-class.Rd man/InferenceEngine-class.Rd man/add.observations-set.Rd man/approxInference.Rd man/belief.propagation.Rd man/benchmarkMultipleNets.Rd man/bn-method.Rd man/bn-set.Rd man/boot.Rd man/boots-set.Rd man/boots.Rd man/bootstrap.Rd man/build.junction.tree.Rd man/complete.Rd man/convertBNBestieToSGS.Rd man/convertCPTsBestieToSGS.Rd man/cpts-set.Rd man/cpts.Rd man/dag-set.Rd man/dag.Rd man/dag.to.cpdag.Rd man/data.file-set.Rd man/data.file.Rd man/discreteness-set.Rd man/discreteness.Rd man/edge.dir.wpdag.Rd man/em.Rd man/exactInference.Rd man/get.allAncestors.Rd man/get.allSubGroups.Rd man/get.most.probable.values.Rd man/get.subGroup.Rd man/has.boots.Rd man/has.imputed.boots.Rd man/has.imputed.data.Rd man/has.raw.data.Rd man/header.file-set.Rd man/header.file.Rd man/imp.boots-set.Rd man/imp.boots.Rd man/impute.Rd man/imputed.data-set.Rd man/imputed.data.Rd man/interventions-set.Rd man/interventions.Rd man/jpts-set.Rd man/jpts.Rd man/jt.cliques-set.Rd man/jt.cliques.Rd man/junction.tree-set.Rd man/junction.tree.Rd man/knn.impute.Rd man/layering.Rd man/learn.dynamic.network.Rd man/learn.network.Rd man/learn.params.Rd man/learn.structure.Rd man/learn_bn.Rd man/loopy_belief.propagation.Rd man/makeAllPlots.Rd man/marginals.Rd man/name-set.Rd man/name.Rd man/node.sizes-set.Rd man/node.sizes.Rd man/num.boots-set.Rd man/num.boots.Rd man/num.items-set.Rd man/num.items.Rd man/num.nodes-set.Rd man/num.nodes.Rd man/num.time.steps-set.Rd man/num.time.steps.Rd man/num.variables-set.Rd man/num.variables.Rd man/observations-set.Rd man/observations.Rd man/plot.Rd man/plot_bn.Rd man/plot_dag.Rd man/print.Rd man/quantiles-set.Rd man/quantiles.Rd man/randomBN.Rd man/raw.data-set.Rd man/raw.data.Rd man/read.bif.Rd man/read.dataset.Rd man/read.dsc.Rd man/read.net.Rd man/sample.dataset.Rd man/sample.row.Rd man/sample.subGroupSampling.Rd man/scoring.func-set.Rd man/scoring.func.Rd man/shd.Rd man/show.Rd man/struct.algo-set.Rd man/struct.algo.Rd man/sub_belief.propagation.Rd man/test.updated.bn.Rd man/tune.knn.impute.Rd man/updated.bn-method.Rd man/updated.bn-set.Rd man/variables-set.Rd man/variables.Rd man/wpdag-set.Rd man/wpdag.Rd man/wpdag.from.dag.Rd man/write.dsc.Rd man/write_xgmml.Rd

src/.DS_Store

src/SGS.c

src/SGS.o

src/SGS.so

src/impfast.c

src/impfast.h

src/impfast.o

src/mmhcfast.c

src/mmhcfast.h

src/mmhcfast.o

src/smfast.c

src/smfast.h

src/smfast.o

src/util.c

src/util.h

src/util.o

tests/testthat.R tests/testthat/test_sl.R

vignettes/.gitignore

vignettes/SGS.Rmd

vignettes/benchmark.png

vignettes/figures/SGS.jpg

vignettes/figures/benchmark.png

vignettes/figures/illustration.png

vignettes/figures/sgs_icon.png

vignettes/figures/summary.pdf

vignettes/sgs_icon.png

cbg-ethz/SubGroupSeparation documentation built on Feb. 11, 2023, 8:29 p.m.

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cbg-ethz/SubGroupSeparation
Inference in Bayesian Networks

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Inference in Bayesian Networks

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cbg-ethz/SubGroupSeparation Inference in Bayesian Networks

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cbg-ethz/SubGroupSeparation
Inference in Bayesian Networks

Files in cbg-ethz/SubGroupSeparation
Inference in Bayesian Networks