API for cbreenmachine/Rray
Utility functions for analyzing EPIC 850K array data, to stay consistent across projects / platforms.
| Global functions | |
|---|---|
| .check_chain | Source code |
| .drop_bad_detection_samples | Man page |
| drop_bad_detection_probes | Source code |
| drop_bad_detection_samples | Source code |
| estimate_cell_comp | Source code |
| fit_models | Source code |
| generate_RGset | Source code |
| get_annotation | Source code |
| get_methylation_estimates | Source code |
| lift_to_hg38 | Source code |
| map_and_filter | Source code |
| normalize | Source code |
| predict_sex | Source code |
| preprocess | Man page Source code |
