Files in cbroeckl/RAMClustR
Mass Spectrometry Metabolomics Feature Clustering and Interpretation

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CRAN-RELEASE

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NAMESPACE

R/RCQC.R R/calculate.similarity.R R/defineExperiment.R R/do.findmain.R R/exportDataset.R R/findfeature.R R/findmass.R R/getData.R R/mergeRCobjects.R R/ramclustR.R R/rc.calibrate.ri.R R/rc.cmpd.cv.filter.R R/rc.cmpd.filter.blanks.R R/rc.cmpd.replace.na.R R/rc.expand.sample.names.R R/rc.export.msp.rc.R R/rc.feature.filter.blanks.R R/rc.feature.filter.cv.R R/rc.feature.normalize.batch.qc.R R/rc.feature.normalize.qc.R R/rc.feature.normalize.quantile.R R/rc.feature.normalize.tic.R R/rc.feature.replace.na.R R/rc.get.csv.data.R R/rc.get.df.data.R R/rc.get.xmcs.data.R R/rc.merge.clusters.R R/rc.qc.R R/rc.ramclustr.R R/rc.remove.qc.R R/rc.restore.qc.samples.R R/write.gcei.mat.R R/write.methods.R R/write.msp.R README.md

conda/environment-dev.yaml

cran-comments.md

docs/ramclustR.png

inst/extdata/featDefinition.rds

inst/extdata/featValues.rds

inst/extdata/peaks.csv

inst/extdata/phenoData.csv

inst/extdata/phenoData_df.rds

inst/params/defparamsets.Rdata

inst/params/greek.csv

inst/params/params.csv

inst/params/paramsets.Rdata

inst/references.txt

tests/testthat/testdata/calibrant.data.csv

tests/testthat/testdata/clustering/normal_rc.ramclustr.rds

tests/testthat/testdata/clustering/only_rt_rc.ramclustr.rds

tests/testthat/testdata/do.findmain.rds

tests/testthat/testdata/input.rc.calibrate.ri.rds

tests/testthat/testdata/ms1_featureDefinitions.rds

tests/testthat/testdata/ms1_featureValues.rds

tests/testthat/testdata/output.msp

tests/testthat/testdata/peaks.csv

tests/testthat/testdata/phenoData.csv

tests/testthat/testdata/phenoData_df.rds

tests/testthat/testdata/rc.calibrate.ri.rds

tests/testthat/testdata/rc.expand.sample.names.rds

tests/testthat/testdata/rc.feature.filter.blanks.rds

tests/testthat/testdata/rc.feature.filter.cv.rds

tests/testthat/testdata/rc.feature.normalize.qc.rds

tests/testthat/testdata/rc.feature.replace.na.rds

tests/testthat/testdata/rc.get.csv.data.rds

tests/testthat/testdata/rc.get.df.data.rds

tests/testthat/testdata/rc.get.xcms.data.rds

tests/testthat/testdata/rc.qc.rds

tests/testthat/testdata/rc.remove.qc.rds

tests/testthat/testdata/rc.restore.qc.samples.rds

tests/testthat/testdata/test.fillpeaks

tests/testthat/testdata/test_csv.rds

vignettes/ExpDes.csv

vignettes/RAMClustR.Rmd

vignettes/spectra/test.mspLib

cbroeckl/RAMClustR documentation built on Sept. 1, 2024, 1:50 a.m.

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cbroeckl/RAMClustR
Mass Spectrometry Metabolomics Feature Clustering and Interpretation

Files in cbroeckl/RAMClustR
Mass Spectrometry Metabolomics Feature Clustering and Interpretation

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cbroeckl/RAMClustR Mass Spectrometry Metabolomics Feature Clustering and Interpretation

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cbroeckl/RAMClustR
Mass Spectrometry Metabolomics Feature Clustering and Interpretation

Files in cbroeckl/RAMClustR
Mass Spectrometry Metabolomics Feature Clustering and Interpretation