Man pages for cbrown5/remixsiar
Post-processing of stable isotope mixing models

calc_eval_measuresFunctions to calculate information divergence measures for...
calchellFunctions to calculate evaluation measures
calcklFunctions to calculate evaluation measures
calcmklFunctions to calculate evaluation measures
calcvarbiaFunctions to calculate evaluation measures
default_priorDefault priors for the simmr package
drawpriorsRandom draws from simmr prior distributions
group_sourcesRegroup sources into n-1 groups based on Pianka's measure
gullsGulls data-set
gulls_cloneOutput of simmr analysis on cloned gull data
gulls_outOutput of simmr analysis on cloned gull data
gulls_polyGulls outside the polygon data-set
gulls_smallGulls data-set with small sample size
iterative_grpIteratively apply 'group_sources' or 'rm_sources'
mixsiar_fitsimsFits a MixSIAR model to a randomly generated data-set
piankaCalculate Pianka's similarity measure on sources
plot_distsCalculates Hellinger distance and plot prior and posterior...
post_chainsExtract chains for the posterior distribution
remix_2DPIIsospace plots of model predicted consumer isotope ratios
remix_hellingerEstimate the Hellinger distance between priors and posteriors
remix_kldivEstimate the Kullback-Leibler divergence between priors and...
remix_pcaPerform a principal components analysis on posterior chains
remix_pcaplotPlot the axes loadings from a PCA
remix_PIEstimate predictive intervals for consumer isotope ratios
remix_shrinkCalculate posterior shrink on parameter estimates
remixsiarTools for model checking of Bayesian isotope mixing models
rm_sourcesRemove similar sources to make n-1 groups based on Pianka's...
simdataSimulate consumer isotope ratios to evaluate posterior model...
simdata_priorsSimulate consumer isotope ratios to evaluate priors
simmr_cloneClone a data-frame then run a simmr model
simmr_fitsimsFits a simmr model to a randomly generated data-set
squidSquid data-set
cbrown5/remixsiar documentation built on April 26, 2020, 12:40 a.m.