| classify_default | classify_default |
| classifyRNA | classifyRNA |
| classSNitch | Package for the autonomous classification of RNA structure... |
| getChangeRange | getChangeRange |
| getChangeVar | getChangeVar |
| getContiguous | getContiguous |
| getESDC | getESDC |
| getFeatures | getFeatures |
| getL2norm | getL2norm |
| getMagCC | getMagCC |
| getPatternCC | getPatternCC |
| getTimeWarping | getTimeWarping |
| mutmap | Consensus classification and features for example RNA SHAPE... |
| normalize | normalize |
| predict.classifyRNA | predict.classifyRNA |
| reduceNoise | reduceNoise |
| shape_ex | 16S rRNA four-way junction wild-type and mutant SHAPE data... |
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