Man pages for cecileane/WGDgc
Whole genome duplication detection using gene counts
| getEdgeOrder | list the tree nodes in a post-order traversal |
| getLikGeneCount | Negative log-likelihood of gene count data |
| logLik_CsurosMiklos | Log-likelihood of count data on a phylogenetic tree |
| MLEGeneCount | Maximum likelihood estimation of gene turnover rates with WGD |
| processInput | Preprocessing function |
| rgenecount | Random generation of family sizes |
| sampleData1 | Simulated gene count data with 1 WGD event |
| sampleData2 | Simulated gene count data with two WGD events |
