Files in cgplab/Rockermeth
Receiver Operating Characteristic curves analyzer for DNA methylation data
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/Rockermeth.R
R/compute_AUC.R
R/compute_z_scores.R
R/data.R
R/find_dmrs.R
R/meth_state_finder.R
R/segmentator.R
R/write_dmr.R
R/write_z_scores.R
README.md
ROCkerMeth.Rproj
data/PRAD_NT_subset.rda
data/PRAD_TP_subset.rda
data/PRAD_auc.rda
data/PRAD_molecular_subtypes.rda
data/PRAD_sample_score.rda
data/auc_toy_vector.rda
data/control_example.rda
data/control_toy_table.rda
data/illumina450k_hg19.rda
data/illumina450k_hg38.rda
data/illuminaEPIC_hg19.rda
data/reference_example.rda
data/reference_toy_table.rda
data/tumor_example.rda
data/tumor_toy_table.rda
man/PRAD_NT_subset.Rd
man/PRAD_TP_subset.Rd
man/PRAD_auc.Rd
man/PRAD_molecular_subtypes.Rd
man/PRAD_sample_score.Rd
man/Rockermeth.Rd
man/auc_toy_vector.Rd
man/compute_AUC.Rd
man/compute_z_scores.Rd
man/control_example.Rd
man/control_toy_table.Rd
man/find_dmrs.Rd
man/illumina450k_hg19.Rd
man/illumina450k_hg38.Rd
man/illuminaEPIC_hg19.Rd
man/meth_state_finder.Rd
man/reference_example.Rd
man/reference_toy_table.Rd
man/segmentator.Rd
man/single_AUC.Rd
man/tumor_example.Rd
man/tumor_toy_table.Rd
man/write_dmr.Rd
man/write_z_scores.Rd
src/MethLibrary.f
tests/testthat.R
tests/testthat/test-2meth_state_finder.R
tests/testthat/test-3find_dmrs.R
tests/testthat/test-4z_score.R
tests/testthat/test-5output.R
tests/testthat/test-9long.R
vignettes/ROCker-Meth.Rmd
