chencxxy28/MultiRD: Multi-robust deconvolution algorithm

MultiRD adopts a penalized regression scheme to incorporate multiple information into the deconvolution process of bulk RNA-seq data. The resulting algorithm is robust against incorrect marker genes, incorrect reference data, and incorrect extra information about the target bulk data (e.g., population-level cell proportions).

Getting started

Package details

AuthorChixiang Chen <chixiang.chen@pennmedicine.upenn.edu>
MaintainerChixiang Chen <chixiang.chen@pennmedicine.upenn.edu>
LicenseArtistic-2.0
Version0.0.1
URL https://github.com/chencxxy28/MultiRD
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("chencxxy28/MultiRD")
chencxxy28/MultiRD documentation built on Dec. 19, 2021, 3:03 p.m.