Man pages for chenyenchung/genofeatutil
Utilities for genomic feature manipulation
| calculate_gene_cor | Calculate Correlation Coefficient from an Expression Matrix |
| convert_gene_to_fbgn | Convert Gene Names to FlyBase Gene Numbers |
| convert_to_genename | Convert Gene Names or FlyBase Gene Numbers to Gene Names... |
| denormalize_genename | Remove Prefix Added When Making Gene Names Legal Variable... |
| distinguish_fbgn | Distinguish FlyBase Gene Numbers from Gene Names |
| fetch_flybase | Downloading FlyBase ID Conversion Table and Symbol Synonym... |
| generate_fbid_version_table | Generate a Conversion Vector for FlyBase IDs from Older... |
| generate_flybase_sym | Generate Conversion Tables for Symbols and Aliases to FlyBase... |
| generate_gene_mapping | Generate a Mapping Vector to Translate Gene IDs |
| get_fbase_url | Retrieving URLs for FlyBase ID and Symbol Synonym Conversion... |
| get_gene_names | Get Gene Names from an Expression Matrix or a Seurat object |
| get_motif_info | Generate a Top Motif List Adjacent to Input Genes Based on... |
| integrate_score | Integrate Score Tables |
| load_rdata | Loading .RData Files Allowing Assignment To An Variable |
| make_database | Make an Reference for Gene Name Conversion |
| make_mtry_series | Generate a Tuning Series of 'mtry' for 'randomForest()' |
| motif_to_tf | Translate SCENIC Motif Names to Corresponding Transcription... |
| normalize_genename | Make Gene Names Legal Variable Names |
| plot_score | Plot a Summary Line Plot or Heatmap from an Integrated Data... |
| prepare_database | Prepare an Unprocessed Database for Gene Name Conversion |
| score_predictors | Scoring Predictors with a Selected Set of Criteria |
| update_fbgn | Update FlyBase Gene Numbers from an Older Version |
| versaread | Load RDS, RData, or CSV Files |
