Man pages for chrisschuerz/SWATplusR
Running SWAT2012 and SWAT+ Projects in R
| add_id | Add id column to output table |
| add_obj | Add the unit values for which objects the parameter change... |
| add_run_info | Prepare run info for the simulation experiment |
| add_slope | Add condition lines based on slope |
| add_soil_luse | Add condition lines based on soil and land use variables |
| add_suffix_to_duplicate | Add suffix value to duplicated column names of SWAT+ output... |
| add_value_range | Add the value range 'val' for the condition variable 'var'... |
| as_num | Convert character string to numeric without displaying... |
| build_constraint_tbl | Build the parameter constraint from the rules in the... |
| build_expression | Build filter expressions from the parameter constraint table' |
| build_model_run | Generate folder structure for parallel SWAT execution |
| check_dates | Check if input start and end dates are given in the weather... |
| check_parameter | Checks if all provided parameters exist in... |
| check_revision | Check the Revision of used SWAT+ executable |
| check_run_index | Checks the provided run_index vector in accordance with... |
| check_swatplus_parameter | Check if the names of the defined parameters are available in... |
| cio_to_numeric | Helper function to convert file.cio entries to numerics |
| collect_cols | Collect selected columns from table in SQLite database |
| compare_tables | Update a time stamp in the run_log table |
| define_output | Define SWAT output variables |
| display_progress | Display the progress if iterative processes |
| display_progress_pct | Display the progress if iterative processes as percentage... |
| evaluate_expression | Evaluate the expression defined for a variable in 'output' |
| extract_non_var_cols | Extract date, plant_name, p columns from the respective... |
| extract_swat2012_output_i | Extract and rearrange output variables of SWAT2012 outputs |
| filter_mon | Filter function to extract only relevant month entries in... |
| find_first_line | Helper function to find the position of the fist line of the... |
| finish_progress | Print message for completed process |
| format_mgt_line | Format a line in the mgt table for writing in correct format... |
| format_swat2012_parameter | Translate the parameter inputs into a parameter input table... |
| format_swatplus_parameter | Translate the parameter inputs into a parameter input table... |
| get_date_vector_2012 | Create date vector from the date info in the model setup of a... |
| get_digit | Get the number of digits that the run_XXX should have based... |
| get_file_header | Read the column names for the SWAT output files |
| get_fwf_positions | Derive the fixed with positions of the columns in the SWAT... |
| get_hru_meta | Extract the meta data from the header of a '.hru' file |
| get_os | Identify the OS (provided by Gabor Csardi) |
| get_par_name | Extract the parameter name from one line in a list parameter... |
| get_sol_texture | Acquire the object indices of from the respective object... |
| get_table | Extract the parameter values that are provided in tabular... |
| get_tbl_column | Acquire the object indices of from the respective object... |
| get_time_interval | Get the time interval between to time stamps |
| get_value | Extract the parameter values from a list parameter file |
| get_value_range | Get the value range from a condition in the par_def table |
| grapes-and-and-grapes | Concatenate with space |
| grapes-and-grapes | Concatenate without separator |
| grapes-grapes | Concatenate with a hyphen |
| grapes-_-grapes | Concatenate with an underscore |
| grapes-.-grapes | Concatenate with a dot |
| grapes-slash-slash-grapes | Paste slash function |
| group_values | Convert the information on available runs for the simulated... |
| group_variable_units | Group variable names which where saved for several spatial... |
| identify_sequence | Group sequences of units together for writing the OBJ columns... |
| init_cal | Initialize the calibration.cal table |
| initialize_run_info | Prepare run info for the simulation experiment |
| initialize_save_file | Initialize the data base wher model outputs are saved |
| is_identical_lst | Check if tables in a list are identical |
| is_identical_tbl | Check if two tables are identical |
| is_par | Check which row in a character vector file holds a model... |
| load_demo | Loading SWAT demo data |
| load_swat_run | Load saved SWAT simulations |
| manage_model_run | Generate folder structure for parallel SWAT execution |
| modify_gen_par | General function to modify parameters that are provided in... |
| modify_mgt_par | Modify parameters that are provided in the management table... |
| modify_parameter | Modify the model parameters of the thread that runs the... |
| mutate_output_i | Transform extracted outputs into a wide table and add suffix... |
| paste_runs | Paste run indexes if start and end of sequence differ.... |
| plural | Add plural 's' to the written message if multiple operations... |
| prepare_error_report | Prepare error report in case of failed simulations |
| prepare_output_definition | Check output if is a data.frame and convert in case to named... |
| read_basin_yld | Read basin yield output tables. |
| read_chm | Read parameters from the '.chm' file (as it has an individual... |
| read_fdcout | Reading the FDC output table. |
| read_file_meta | Read the meta information for the parameter files |
| read_hru | Read all '.hru' files in the project_path and extract the... |
| read_mgt | Read parameters from the '.mgt' file (as it has an individual... |
| read_mgtout | Read and process SWAT+ management outputs. |
| read_output_i | Reading the i_th SWAT+ output file, filter required units and... |
| read_par_list | Read parameters that are arranged in a simple list (1... |
| read_sol | Read parameters from the '.sol' file (as it has an individual... |
| read_swat2012_files | Read the original swat parameter values from the parameter... |
| read_swat2012_output | Read SWAT output files |
| read_swatplus_output | Read SWAT+ output files |
| read_unit_conditions | Read the unit numbers (for hru, aqu, cha, res) and the... |
| remove_dummy | Remove the generated dummy column that was required for the... |
| remove_non_var_cols | Extract variable columns from the respective simulation... |
| remove_units_2012 | Remove the units from variable names in output files of... |
| remove_units_plus | Remove the units from variable names in output files of SWAT+... |
| replace_colname_na | Fix issues with shifted col_names in SWAT+ rev59.3 |
| run_os | Add './' to run the exe on unix systems |
| run_swat2012 | Run a SWAT2012 project |
| run_swatplus | Run SWAT+ |
| save_error_log | Save error report of model run i in error_log sql data base |
| save_run | Save results of model run i in existing sql data base |
| scan_save_files | Scan the save folders of a SWAT run and return all meta data... |
| scan_swat_run | Retrieve information on saved SWAT runs |
| set_colnames | Set the column names of a matrix |
| set_save_path | Set the save path to the sqlite data base file |
| setup_calibration_cal | Setup the calibration.cal file and include all parameter... |
| setup_swat2012 | Reads and modifies the SWAT projects' filo.cio according to... |
| setup_swatplus | Reads and modifies the SWAT+ projects' files that define the... |
| split_by_units | Split header line at the positions of units and return tidy... |
| split_line | Split one line in a parameter file into the individual values... |
| split_out_tbl | Split tables with more than ncol_max columns into list of... |
| tidy_constraint | Apply a set of operations to the rule strings to check and... |
| tidy_simulations | Tidy up and rearrange simulation results before returning... |
| translate_outfile_names | Translate the output file settings defined according to... |
| translate_parameter_constraints | Translate the parameter inputs and the set constraints into... |
| translate_rev55 | Translate the output file settings defined according to... |
| translate_rev57 | Translate the output file settings defined according to... |
| translate_sequence | Translate the unit sequences to calibration.cal syntax |
| truncate | Truncate long character vectors |
| update_par | Update parameter values according to the different options... |
| update_plant_par | Modify plants.plt parameters |
| update_sim_log | Update a time stamp in the run_log table |
| write_calibration | Update the calibration file structure with the parameter set... |
| write_chm | Write modified .chm SWAT parameter files due to their... |
| write_file_cio | Write the updated file.cio to all parallel folders |
| write_mgt | Write modified .mgt SWAT parameter files due to their... |
| write_parameter | Write modified SWAT parameter files in respective thread... |
| write_par_list | Write modified SWAT parameter files that are arranged in a... |
| write_sol | Write modified .sol SWAT parameter files due to their... |
| write_swatplus_setup | Write the updated init files to all parallel folders |
