Files in cmc-aau/midasdashboard
MiDAS dashboard shiny app
.Rbuildignore
.devcontainer/devcontainer.json
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/pr-commands.yaml
.gitignore
.gitmodules
CODE_OF_CONDUCT.md
DESCRIPTION
LICENSE.md
Meta/vignette.rds
NAMESPACE
NEWS.md
R/_disable_autoload.R
R/app_config.R
R/app_server.R
R/app_ui.R
R/golem_utils_server.R
R/golem_utils_ui.R
R/run_app.R
README.md
ansible/README.md
ansible/files/app.R
ansible/files/default.conf
ansible/files/shiny-server.subfolder.conf
ansible/handlers/main.yml
ansible/hosts
ansible/playbook.yml
ansible/roles/requirements.yml
app.R
data-raw/MiDAD_Quarterly_samples_2006-2018_OTUs/archea_V3V5/16S.aV35.workflow_v4.3_NewMIDAS_Rasmus.sh
data-raw/MiDAD_Quarterly_samples_2006-2018_OTUs/archea_V3V5/metadata_midad_archaea.xlsx
data-raw/MiDAD_Quarterly_samples_2006-2018_OTUs/archea_V3V5/otus.zip
data-raw/MiDAD_Quarterly_samples_2006-2018_OTUs/archea_V3V5/otutable.zip
data-raw/MiDAD_Quarterly_samples_2006-2018_OTUs/archea_V3V5/samples
data-raw/MiDAD_Quarterly_samples_2006-2018_OTUs/archea_V3V5/stats.txt
data-raw/MiDAD_Quarterly_samples_2006-2018_OTUs/bacteria_V1V3/16S.V13.workflow_v4.3.sh
data-raw/MiDAD_Quarterly_samples_2006-2018_OTUs/bacteria_V1V3/metadata_midad_bacteria_with_add_files.xlsx
data-raw/MiDAD_Quarterly_samples_2006-2018_OTUs/bacteria_V1V3/otus.zip
data-raw/MiDAD_Quarterly_samples_2006-2018_OTUs/bacteria_V1V3/otutable.zip
data-raw/MiDAD_Quarterly_samples_2006-2018_OTUs/bacteria_V1V3/samples
data-raw/MiDAD_Quarterly_samples_2006-2018_OTUs/bacteria_V1V3/stats.txt
data-raw/README.md
data-raw/[2018-12-3] data/MiDAS/metadata_ShinyApp_2018.xlsx
data-raw/[2018-12-3] data/MiDAS/otus.zip
data-raw/[2018-12-3] data/MiDAS/otutable.zip
data-raw/[2018-12-3] data/MiDAS/samples
data-raw/[2018-12-3] data/midad (not used).zip
data-raw/aarhusvand CP332/16S.V13.workflow_v4.3_NewMiDAS_AD_extensivesearch.sh
data-raw/aarhusvand CP332/CP332_metadata.xlsx
data-raw/aarhusvand CP332/CP332_metadata_v5.2.xlsx
data-raw/aarhusvand CP332/otus.zip
data-raw/aarhusvand CP332/otutable.zip
data-raw/aarhusvand CP332/samples
data-raw/aarhusvand CP332/stats.txt
data-raw/biobank_ad.R
data-raw/biobank_ad/220114_metadataBioBank_Archaea.txt
data-raw/biobank_ad/220114_metadataBioBank_Bacteria.txt
data-raw/biobank_ad/ASVs.R1.midas481.zip
data-raw/biobank_ad/ASVs.R1.zip
data-raw/biobank_ad/ASVtable.zip
data-raw/biobank_ad/asvpipeline_20211118_083958.txt
data-raw/biobank_ad/samples
data-raw/biobank_as.R
data-raw/egaamarselisborg.R
data-raw/helper-functions.R
data-raw/mfg_functions.R
data-raw/mfg_functions.csv
data-raw/midad.R
data-raw/midasok.R
data-raw/old_midas.R
data-raw/sweden.R
data/MiDAS.rda
data/biobank_ad_arc.rda
data/biobank_ad_bac.rda
data/biobank_as.rda
data/biobanksweden_arc.rda
data/biobanksweden_bac.rda
data/egaamarselisborg.rda
data/mfg_functions.rda
data/midad_arc.rda
data/midad_bac.rda
data/midasok.rda
dev/01_start.R
dev/02_dev.R
dev/03_deploy.R
dev/run_dev.R
doc/midasdashboard.R
doc/midasdashboard.Rmd
doc/midasdashboard.html
inst/Guide til MiDAS Shiny App-phn-mni-ksa.docx
inst/WORDLIST
inst/app/www/ajax-loader-black.gif
inst/app/www/ajax-loader-white.gif
inst/app/www/logo.png
inst/app/www/logo.xcf
inst/app/www/logobig.png
inst/app/www/logobigtrans.png
inst/app/www/logonologo.png
inst/app/www/logosmall.png
inst/app/www/logotrans.png
inst/app/www/test.png
inst/app_guide.pdf
inst/golem-config.yml
inst/plantinfo.csv
inst/rcolors.pdf
man/run_app.Rd
renv.lock
tests/spelling.R
tests/testthat.R
tests/testthat/test-golem-recommended.R
vignettes/.gitignore
vignettes/midasdashboard.Rmd
