Man pages for comtook/afmFreeEnergy
Calculate Adsorption Free Energy Using Gamma Estimator of Jarzynski Equality
| AlignForceZ | Perform a baseline correction to an AFM F-z curve |
| bootGamma | Estimate Free Energy Error Using Bootstrap for Gamma |
| bootNorm | Estimate Free Energy Error Using Bootstrap for Norm |
| CalcSlope | Map F-D curves to Derivative Space |
| ClassifyNoPeaks | The main function classifies data into five classes according... |
| FindBPoints | Locate significant minima on an AFM F-Z curve |
| FindDPoints | Locate discontinuous points on an AFM F-Z curve |
| FindKeyPoints | Find binding points, zero force points, quasi-equilibrium... |
| FindMinima | Locate all minima on an AFM F-Z curve |
| FindQPoints | Locate quasi-equilibrium points on an AFM F-Z curve |
| FitWLC | Fit into Worm-Like Chain Model |
| GammaEstimator | Estimate Free Energy Assuming Underlying Gamma Distribution |
| GaussianEstimator | Estimate Free Energy Assuming Underlying Norm Distribution |
| HistPlot | Plot histograms of all variables |
| MakeDirNoPeaks | Make subdirectories in output directory according to number... |
| PlotExRt | Plot raw data in images directory |
| PlotQFWLC | Plot F-Q curves |
| PlotRawData | Plot raw data in images directory |
| PostProcess | Get rid of outliers |
| TiltCorrection | Perform a baseline correction to an AFM F-Z curve |
| TrapZ | Simple Integration |
