Man pages for danStich/dia
R package for Atlantic salmon Dam Impact Analysis (DIA) model
| dia | dia: Atlantic salmon Dam Impact Analysis (DIA) for R |
| downstream_brownsmills | Downstream data for Browns Mills |
| downstream_frankfort | Downstream data for Frankfort |
| downstream_greatworks | Downstream data for Great Works |
| downstream_howland | Downstream data for Howland |
| downstream_lowell | Downstream data for Lowell |
| downstream_mattaceunk | Downstream data for Mattaceunk |
| downstream_medway | Downstream data for Medway |
| downstream_milford | Downstream data for Milford |
| downstream_milford_old | Downstream data for Milford (old) |
| downstream_milo | Downstream data for Milo |
| downstream_moosehead | Downstream data for Moosehead |
| downstream_orono | Downstream data for Orono |
| downstream_orono_old | Downstream data for Orono |
| downstream_sebec | Downstream data for Sebec |
| downstream_stillwater | Downstream data for Stillwater |
| downstream_stillwater_old | Downstream data for Stillwater (old) |
| downstream_veazie | Downstream data for Veazie |
| downstream_westenfield | Downstream data for West Enfield |
| get_dam_passage | Get dam-specific survival rates |
| inefficiency_matrix | Inefficiency matrix |
| in_river_m | In river mortality |
| life_stage_survival | Life-stage survival rates |
| make_eggs_per_female | Simulate eggs per female |
| make_egg_to_smolt_survival | Simulate egg-to-smolt survival |
| make_inriver_s | Create natural in-river smolt survival by reach |
| make_marine_s | Simulate marine survival |
| n_dams | Number of dams by natal production unit (PU) and migration... |
| production_units | Production unit table |
| river_sections | River sections |
| run_dia | Run the Dam Impact Analysis |
| run_dia_shiny | Run the DIA model interactively with shiny |
| run_downstream_passage | Run downstream passage routine |
| run_inefficiency | Run adult passage inefficiency |
| run_one_gen | Run the Dam Impact Analysis for One Generation |
| run_straying | Run adult straying routine |
| run_upstream_passage | Run upstream migration routine |
| smolt_stocking | Smolt stocking by production unit |
| stillwater_use | Stillwater Use |
| stillwater_use_old | Stillwater Use (old) |
| stocking_default | Default stocking proportions by production unit |
| straying_locations | Straying locations |
| straying_matrix | Straying matrix |
| upstream_inefficiency | Upstream inefficiency of adult migrants |
