Man pages for darcyj/specificity
Calculate Environmental or Host Phylogenetic Specificity
| aggregate_specs_list | aggregate_specs_list |
| bl_distance_ns | bl_distance_ns |
| calculate_spec_and_pval | calculate_spec_and_pval |
| check_pes_inputs | check_pes_inputs |
| circularize2dist | circularize2dist |
| distcalc | distcalc |
| endophyte | Foliar endophytic fungi across the Hawaiian Archipelago |
| fit_gamma_fwd_rev | fit_gamma_fwd_rev |
| gamma_hist_cor | fit_gamma_fwd_rev |
| get_ga_defaults | get_ga_defaults |
| make_nested_set | make_nested_set |
| mode_gamma_fwd_rev | mode_gamma_fwd_rev |
| occ_threshold | occ_threshold |
| onto2nwk | onto2nwk |
| pairwise_product | pairwise_product |
| p_from_perms_or_gfit | p_from_perms_or_gfit |
| p_gamma_fwd_rev | p_gamma_fwd_rev |
| phy_or_env_spec | phy_or_env_spec |
| plot_grid_abunds | plot_grid_abunds |
| plot_pairwise_spec | plot_pairwise_spec |
| plot_specs_stacks | plot_specs_stacks |
| plot_specs_violin | plot_specs_violin |
| prop_abund | prop_abund |
| randomgrid | randomgrid |
| random_rep_positions | random_rep_positions |
| rao1sp | rao1sp |
| rao_genetic_max | rao_genetic_max |
| raoperms | raoperms |
| tips_from_node | tips_from_node |
| tree2mat | tree2mat |
| wpd | wpd |
| wpd_table | wpd_table |
