Files in dd-harp/globalrc
Computes Control Reproductive Number, Rc, from PfPR and Treatment Levels
.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/pkgdown.yaml
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/README.md
R/block_work.R
R/cmdline.R
R/country_outline.R
R/domain_decomposition.R
R/estimate_rc_script.R
R/extents.R
R/globalrc.R
R/hilbert.R
R/interpolation.R
R/load_variables.R
R/parallel.R
R/pixel_compare.R
R/pixel_work.R
R/plan_io.R
R/rc_kappa.R
R/save_variables.R
R/serialize.R
R/slice_main.R
R/tile_io.R
README.md
githooks/pre-commit
inst/testdata/rc_kappa.toml
julia/rc_sensitivity.jl
man/apply_relative_extent.Rd
man/ar_of_pr_rho.Rd
man/arg_parser.Rd
man/assemble.Rd
man/build_ar2pr.Rd
man/check_args.Rd
man/check_linearized_outputs.Rd
man/chunk_nonzero.Rd
man/chunk_sums.Rd
man/collect_and_permute.Rd
man/combine_output.Rd
man/construct_plan.Rd
man/data_for_country.Rd
man/decode_hilbert.Rd
man/draw_parameters.Rd
man/draw_parameters_three.Rd
man/draw_parameters_two.Rd
man/encode_hilbert.Rd
man/encode_hilbert_zero.Rd
man/find_relative_extent.Rd
man/flatten_draws.Rd
man/funcmain.Rd
man/gadm_country_shapefile.Rd
man/globalrc.Rd
man/improved_errors.Rd
man/is_tile.Rd
man/linearized_work.Rd
man/load_data.Rd
man/load_pixel_script.Rd
man/load_plan.Rd
man/main.Rd
man/my_tasks.Rd
man/over_block_draw.Rd
man/pixel_bounding_box.Rd
man/pixel_four.Rd
man/pixel_three.Rd
man/pixel_two.Rd
man/plan_domain_decomposition.Rd
man/plot_as_png.Rd
man/prepare_timeseries.Rd
man/raster_extent_from_work.Rd
man/read_dataset_names.Rd
man/remove_tiles_over_water.Rd
man/save_chunks.Rd
man/save_plan.Rd
man/slice_funcmain.Rd
man/slice_main.Rd
man/summarize_draws.Rd
man/task_work.Rd
man/task_work_from_tiles.Rd
man/worker.Rd
man/write_output.Rd
man/years_in_filenames.Rd
notebooks/check_pixel_work.Rmd
notebooks/plot_rc.Rmd
notebooks/rc_kappa.Rmd
scripts/Makefile
scripts/rc_assemble_base.sh
scripts/rc_cluster.R
scripts/rc_kappa.sh
scripts/rc_kappa.toml
scripts/rc_kappa_run.R
scripts/rc_kappa_think.R
scripts/rc_run_assemble.R
scripts/rc_run_plan.R
scripts/rc_run_worker.R
scripts/rc_worker.sh
scripts/rc_worker_base.sh
scripts/sam_mean.toml
scripts/sam_worker.sh
scripts/world_mean.toml
scripts/world_worker.sh
tests/testthat.R
tests/testthat/helper-data_dependency.R
tests/testthat/test-country_outline.R
tests/testthat/test-pixel_work.R
tests/testthat/test-plan_io.R
tests/testthat/test-rc_kappa.R
tests/testthat/test-serialize.R
vignettes/africa_blocked.png
vignettes/cluster.Rmd
vignettes/cluster_intro.Rmd
vignettes/getstarted.Rmd
vignettes/split_by_time_slice.Rmd
