API for deepayan/hmmcount
Fitting Hidden Markov Models for Count Data
| Global functions | |
|---|---|
| anova.coverageHmm | Source code |
| backward.hmm | Source code |
| barchart.coverageHmm | Source code |
| baumwelch.hmm | Source code |
| computeIntervals | Source code |
| copyNumberPlot | Source code |
| coverageHmm | Source code |
| decode | Source code |
| decode.mean | Source code |
| decode.mode | Source code |
| decode.viterbi | Source code |
| forward.hmm | Source code |
| hmm.family | Source code |
| logLik.coverageHmm | Source code |
| mean.emissions | Source code |
| nb.cond.family | Source code |
| posterior.hmm | Source code |
| print.coverageHmm | Source code |
| print.summary.coverageHmm | Source code |
| rootogram.coverageHmm | Source code |
| stationary.distribution | Source code |
| summary.coverageHmm | Source code |
| update.coverageHmm | Source code |
| write.hmm | Source code |
| xyplot.coverageHmm | Source code |
