Man pages for dozmorovlab/TADCompare
TADCompare: Identification and characterization of differential TADs
| ConsensusTADs | Consensus boundary identification |
| DiffPlot | Visualization of differential TAD boundaries |
| GM12878.40kb.raw.chr2 | A subset of chomosome 2 contact matrix, GM12878 cell line. |
| IMR90.40kb.raw.chr2 | A subset of chomosome 2 contact matrix, IMR90 cell line. |
| rao_chr22_prim | Chromosome 22 combined intrachromosomal primary contact... |
| rao_chr22_rep | Chromosome 22 combined intrachromosomal replicate contact... |
| TADCompare | Differential TAD boundary detection |
| TimeCompare | Time-varying TAD boundary analysis |
| time_mats | Chromosome 22 time-varying contact matrices from Rao et al.... |
