Man pages for dpasqualin/sfreemapc
Simulation Free Stochastic Mapping
| correlation | Creates an object that can be used to plot a correlation... |
| describe.sfreemap | describe a 'phylo' object modified by sfreemap |
| map_posterior_distribution | Analyses a set of trees regarding to a specific tree and... |
| plot.correlation | Plot a correlation matrix |
| plot_distribution_chart | Plot the distribution of states in a given node |
| plot_distribution_tree | Plot the dwelling times distribution of a state in a given... |
| pruning | Prune a phylogetic tree |
| read_tips | Read the tip states and labels from a file |
| reorder.sfreemap | Reorder a 'phylo' object modified by sfreemap |
| rescale | Rescale branches of a 'phylo' or 'multiPhylo' object to a... |
| sfreemap | Simulation free stochastic character mapping on a... |
| sfreemap.corals.tips | Tip data for sfreemap.corals.trees |
| sfreemap.corals.trees | Partial sequences of the 12S and 28S rRNA for 108 species of... |
| sfreemap-package | Simulation Free Stochastic Mapping |
| sfreemap.primates.dna.tips | Tip data for sfreemap.primates.trees |
| sfreemap.primates.summary.tree | Taxonomic sampling of Old World monkeys |
| sfreemap.primates.trees | Taxonomic sampling of Old World monkeys |
