Man pages for dswdejonge/fwstability
Infer Food-Web Stability
| assessComps | Assess stability effect of each compartment. |
| assessFeedback | Assess feedback characteristics of network |
| assessLinksFixed | Assess stability effect of a fixed link alteration |
| assessLinksPerm | Assess probability of destabilizing system per interaction |
| averageMutualInfo | Get average mutual information. |
| dfs | Depth-First-Search wrapper |
| dfsall | Depth-First-Search all loops |
| dfsk | Depth-First-Search loops of length k |
| effectOnConsumer | Per capita effect on consumer population. |
| effectOnResource | Per capita effect on resource population. |
| extractLIMdata | Extract data from formatted LIM. |
| fluxSizeDiversity | Get flux size diversity. Calculates the diversity in flux... |
| getCE | Get conversion efficiencies from a LIM. |
| getConnPerNode | Get effective or topological connectance per node. |
| getCw | Get weighted connectance. |
| getDeadInfo | Gets list with information on dead compartments. |
| getDiagonal | Calculate Jacobian diagonal from flux values |
| getDiagonalDetritus | Calculate diagonal for dead (detritus) compartments |
| getFeedback | Get loop feedback |
| getFlowMatrix | Get Flowmatrix from LIM |
| getJacobian | Jacobian matrix from an energy-flux model |
| getJacobianEnergyFlux | Jacobian matrix with interaction strengths |
| getLoopWeight | Get loop weight. |
| getMortalityRates | Calculate mortality rates from energy-fluxes |
| getMR | Get mortality rates from a LIM. |
| getStability | Get the mathematical stability of a matrix. |
| getVariables | Calculate value of LIM variables from flow solutions. |
| maxNrLoops | Maximum number of loops |
| normalizeJacobian | Normalize the Jacobian matrix |
