Files in eMetaboHUB/MS-CleanR

Cleans MS Data for Easier Analyses

MS-Dial-CleanR-Finder-Tutorial-v1c.pdf R/adducts_nl_functions.R R/annotation_functions.R R/checks.R R/clean_msdial_data.R R/convert_csv_to_msp.R R/documentation_help.R R/global_parameters.R R/inputs_outputs.R R/keep_top_peaks.R R/launch_msfinder_annotation.R R/mscleanr.R R/msdial_functions.R R/msfinder_functions.R R/runGUI.R R/utility_functions.R README.md man/annotate_cluster.Rd man/check_architecture_for_clean_msdial_data.Rd man/check_architecture_for_keep_top_peaks.Rd man/check_architecture_for_launch_msfinder_annotation.Rd man/check_boolean.Rd man/check_for_convert_csv_to_msp.Rd man/check_input_parameters_keep_top_peaks.Rd man/check_input_parameters_launch_msfinder.Rd man/check_input_parameters_msdial_data.Rd man/check_main_architecture.Rd man/check_path.Rd man/check_positive_int.Rd man/check_positive_num.Rd man/check_probability.Rd man/check_references.Rd man/choose_project_directory.Rd man/clean_for_current_run.Rd man/clean_msc_combinations.Rd man/clean_msdial_data.Rd man/clear_duplicate_links.Rd man/compute_massdiff.Rd man/concat_msp_files.Rd man/convert_csv_to_msp.Rd man/detect_posneg_combinations.Rd man/detect_single_polarity_combinations.Rd man/export_data.Rd man/extract_concatenated_data_from_column.Rd man/extract_msdial_links.Rd man/find_structure.Rd man/get_adducts_nl_links.Rd man/get_confirmation_for_overwriting.Rd man/get_most_probable.Rd man/get_pattern_file.Rd man/get_project_file_path.Rd man/get_samples_info.Rd man/import_data.Rd man/import_msdial_data.Rd man/import_msdial_file.Rd man/import_msfinder_base_file.Rd man/import_msfinder_data.Rd man/import_msfinder_formula_file.Rd man/import_msfinder_structure_file.Rd man/increment_strings.Rd man/keep_top_peaks.Rd man/launch_msfinder_annotation.Rd man/mass_adducts_neg.Rd man/mass_adducts_pos.Rd man/mass_isotopes.Rd man/mass_neutral_loss_neg.Rd man/mass_neutral_loss_pos.Rd man/matrix_to_df.Rd man/mscleanr.Rd man/print_message.Rd man/print_peaks_status.Rd man/print_warning.Rd man/recurrent_params.Rd man/runGUI.Rd man/stop_script.Rd man/substrRight.Rd man/update_annotations_scores.Rd