Man pages for edwardlavender/fvcom.tbx
An R Toolbox for the Unstructured Grid Finite Volume Community Ocean Model (FVCOM)
| build_mesh | Build unstructured meshes |
| calc_direction | Calculate wind or current direction from u and v component... |
| calc_speed | Calculate wind or current speed from u and v component... |
| calc_thermocline | Calculate thermocline strength |
| check_class | Check the class of an function input to a parent function |
| check_dir | Check a directory exists |
| check_length | Check the length of an input to a parent function |
| check_named_list | Check that a list is named |
| check_names | Check the names of an object contain required names |
| check_value | Check the input value to a parent function argument |
| colour_bar | Add a colour bar to a plot |
| compute_field_from_fvcom | Compute new hydrodynamic fields |
| compute_field_photoperiod | Compute photoperiod across an FVCOM mesh |
| compute_field_sun_angle | Compute sun angle across an FVCOM mesh |
| create_wcdirs | Create folders in which to save environmental arrays |
| dat_area_boundaries | The sample area around Oban |
| dat_coast_around_oban | The coastline around Oban |
| date_name | Flip between WeStCOMS file names and dates |
| dat_h | The depth of the seabed at each node below mean sea level |
| dat_mesh_around_elements | The WeStCOMS mesh around a sample of elements in the Oban... |
| dat_mesh_around_nodes | The WeStCOMS mesh around a sample of nodes in the Oban area |
| dat_nodexy | The coordinates of each node |
| dat_siglev | The siglev constants for each Sigma layer |
| dat_temp | A sample of surface temperatures around Oban on 2016-03-01. |
| dat_tidal_elevation | A sample of tidal elevations around Oban on 2016-03-01. |
| dat_trinodes | The nodes which surround each element |
| dat_uwind_speed | A sample of eastward wind speeds around Oban on 2016-03-01. |
| dat_vwind_speed | A sample of northward wind speeds around Oban on 2016-03-01. |
| define_dates2load | Create a dataframe that specifies which FVCOM files to load |
| depth_from_known | Calculate the depths of Sigma layers with known inputs |
| depth_from_unknown | Compute the depth of Sigma layers at specified location(s)... |
| exclude_corrupt | Exclude any rows in a dataframe associated with corrupt FVCOM... |
| exclude_unavailable | Exclude any rows in a dataframe associated with unavailable... |
| expand_by_hour | Expand a dataframe with non-integer hours into one with... |
| explore_field_2d | Explore 2-dimensional FVCOM fields |
| extract | Extract predictions from FVCOM arrays |
| find_cells | Identify the mesh cells enclosing coordinates |
| find_xy | Find the coordinates of specified mesh cells |
| fvcom_array_to_df | Convert an FVCOM array to a dataframe for 'plot_field_2d' |
| fvcom.tbx | fvcom.tbx: An R Toolbox for the Unstructured Grid Finite... |
| interp_btw_depths | Interpolate an FVCOM prediction between depths |
| interp_btw_hours | Interpolate an FVCOM prediction between hours |
| interp_layer | Interpolate a fractional layer number for an observation... |
| match_ts_nearest | Find the position in one vector that is nearest in time to a... |
| match_ts_nearest_by_key | Match timeseries by key and time |
| pair_ts | Pair timeseries |
| pipe | Pipe operator |
| plot_field_2d | Map 2-dimensional fields |
| quiver | quiver |
| shrink_by_hour | Shrink a dataframe with predictions at integer hours to one... |
| summarise_field_2d | Calculate summary statistics over 2-dimensional fields |
| thredds_download | Download FVCOM outputs from the SAMS thredds server |
| thredds_extract | Extract FVCOM outputs from the SAMS thredds server |
| validate | Validate FVCOM predictions with observations |
