empiricalbayes/CSCDRNA: Covariance Based Single-Cell Decomposition of Bulk Expression Data

Provides accurate cell type proportion estimation by incorporating covariance structure in both single-cell and bulk RNA-seq datasets into the analysis. For more detail, see Karimnezhad, A. (2022) <doi:10.1101/2022.05.13.491858>.

Getting started

Package details

AuthorAli Karimnezhad [aut, cre, ctb]
Bioconductor views MAST
MaintainerAli Karimnezhad <ali.karimnezhad@gmail.com>
LicenseGPL-3
Version1.0.3
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("empiricalbayes/CSCDRNA")
empiricalbayes/CSCDRNA documentation built on Jan. 15, 2024, 12:44 a.m.