.Rbuildignore
.Renviron
.github/workflows/docker-build.yaml
.gitignore
DESCRIPTION
Dockerfile
LICENSE
LICENSE.md
R/update-data.R
R/update-delays.R
R/update-rt.R
R/utils.R
README.md
bin/update.sh
covid-rt-brazil-subregional.Rproj
data/cases/2020-11-24.csv
data/delays/generation_time.rds
data/delays/incubation_period.rds
data/delays/onset_to_report.rds
data/rt/2020-11-24/cases_by_infection.csv
data/rt/2020-11-24/cases_by_report.csv
data/rt/2020-11-24/growth_rate.csv
data/rt/2020-11-24/high_infections_plot.png
data/rt/2020-11-24/high_reported_cases_plot.png
data/rt/2020-11-24/high_rt_plot.png
data/rt/2020-11-24/latest_date.rds
data/rt/2020-11-24/reported_cases.csv
data/rt/2020-11-24/rt.csv
data/rt/2020-11-24/summary_data.csv
data/rt/2020-11-24/summary_plot.png
data/rt/2020-11-24/summary_table.csv
data/shapefile/brazil-admin-2.rds
docs/footer.html
docs/header.html
docs/index.Rmd
docs/index.html
logs/cases/.gitignore