API for exaexa/ShinySOM
Shiny-based DiffSOM workflow wrapper
| Global functions | |
|---|---|
| Dissect | Man page Source code |
| ExportDF | Man page Source code |
| ExportFlowFrame | Man page Source code |
| LoadCells | Man page Source code |
| PopulationKeys | Man page Source code |
| PopulationSizes | Man page Source code |
| Process | Man page Source code |
| ShinySOM | Man page Source code |
| annotationGather | Source code |
| annotationRender | Source code |
| annotationServe | Source code |
| datasetExists | Source code |
| datasetNameValid | Source code |
| debounce | Source code |
| diffsomRenderEmbedding | Source code |
| diffsomRenderTransform | Source code |
| dsClearDataset | Source code |
| dsCreateDoClone | Source code |
| dsCreateDoDelete | Source code |
| dsCreateDoLoad | Source code |
| dsCreateDoLoadInternal | Source code |
| dsCreateFiles | Source code |
| dsCreateLoadPrettyCols | Source code |
| dsCreatePrettyColnames | Source code |
| dsExportDF | Source code |
| dsExportFlowFrame | Source code |
| dsExportPopSizes | Source code |
| dsGetDataset | Source code |
| dsInitFromDataset | Source code |
| findColIds | Source code |
| formatPVal | Source code |
| gatherOverviewColorDim | Source code |
| gatherOverviewPlotDim | Source code |
| getClustEmbedData | Source code |
| getDatasetPath | Source code |
| getForeignRoots | Source code |
| getHeatmapColors | Source code |
| getRoot | Source code |
| ilDiv | Source code |
| listDatasets | Source code |
| loadDataset | Source code |
| loadFCSAggregate | Source code |
| loadFCSColnames | Source code |
| loadFCSTryCompensate | Source code |
| namesInvert | Source code |
| overviewRender | Source code |
| overviewRenderPlot | Source code |
| overviewServe | Source code |
| pad.zero | Source code |
| persistentP | Source code |
| plotClustEmbed | Source code |
| plotClusterTextAnnotation | Source code |
| plotDsADiff | Source code |
| plotDsAExprs | Source code |
| plotDsAPopLegend | Source code |
| plotDsAPopSizes | Source code |
| plotDsASig | Source code |
| plotDsASigLegend | Source code |
| plotEmbedExpr | Source code |
| plotOverview | Source code |
| plotOverviewDimsWithColor | Source code |
| plotOverviewHist | Source code |
| plotSOMOverview | Source code |
| reactiveValsDiffsom | Source code |
| reactiveValsForeign | Source code |
| removeDataset | Source code |
| renderDiffsom | Source code |
| renderDsCreate | Source code |
| renderDsCreateClone | Source code |
| renderDsCreateDelete | Source code |
| renderDsCreateFileNum | Source code |
| renderDsCreateFinalize | Source code |
| renderDsCreateNormalize | Source code |
| renderForeign | Source code |
| renderMenu | Source code |
| renderTransformParams | Source code |
| render_foreignDownload | Source code |
| saveDataset | Source code |
| serveDsCreate | Source code |
| serveForeign | Source code |
| serveMenu | Source code |
| server | Source code |
| setClustNAs | Source code |
| setMenuDataset | Source code |
| sliderAlpha | Source code |
| sliderPointSize | Source code |
| tooltip | Source code |
| transformDoScale | Source code |
| transformFind | Source code |
| transformedDsData | Source code |
| transformedDsDataByDesc | Source code |
| unsetClustNAs | Source code |
| wrapHClustFunc | Source code |
