API for facilebio/FacileBiocData
FacileData API wrappers over Bioconductor assay containers.
| Global functions | |
|---|---|
| .cleanup_adata | Source code |
| .empty_feature_frame | Source code |
| .empty_sample_covariates | Source code |
| .infer_assay_type | Source code |
| .init_assay_info | Source code |
| .init_assay_sample_info | Source code |
| .init_fdata | Source code |
| .init_pdata | Man page Source code |
| .to_DESeqDataSet | Source code |
| .to_DGEList | Source code |
| .to_EList | Source code |
| .to_ExpressionSet | Source code |
| .to_MultiAssayExperiment | Source code |
| .to_SingleCellExperiment | Source code |
| .to_SummarizedExperiment | Source code |
| FacileBiocData | Man page |
| FacileBiocData-package | Man page |
| FacileBiocDataStore | Man page |
| FacileBiocDataStore-class | Man page |
| adata | Source code |
| adata.DESeqDataSet | Source code |
| adata.DGEList | Source code |
| adata.EList | Source code |
| adata.ExpressionSet | Source code |
| adata.MultiAssayExperiment | Source code |
| adata.SingleCellExperiment | Source code |
| adata.SummarizedExperiment | Source code |
| assay_info.FacileBiocDataStore | Source code |
| assay_names.DESeqDataSet | Source code |
| assay_names.DGEList | Source code |
| assay_names.EList | Source code |
| assay_names.ExpressionSet | Source code |
| assay_names.MultiAssayExperiment | Source code |
| assay_names.SingleCellExperiment | Source code |
| assay_names.SummarizedExperiment | Source code |
| assay_sample_info.FacileBiocDataStore | Source code |
| biocbox.FacileBiocDataStore | Source code |
| covariate_definitions.FacileBiocDataStore | Source code |
| default_assay.FacileBiocDataStore | Source code |
| example_bioc_data | Man page Source code |
| facilitate | Man page |
| facilitate.DESeqDataSet | Man page Source code |
| facilitate.DGEList | Man page Source code |
| facilitate.EList | Source code |
| facilitate.ExpressionSet | Source code |
| facilitate.MultiAssayExperiment | Source code |
| facilitate.SingleCellExperiment | Source code |
| facilitate.SummarizedExperiment | Source code |
| fdata | Source code |
| fdata.DESeqDataSet | Source code |
| fdata.DGEList | Source code |
| fdata.EList | Source code |
| fdata.ExpressionSet | Source code |
| fdata.MultiAssayExperiment | Source code |
| fdata.SingleCellExperiment | Source code |
| fdata.SummarizedExperiment | Source code |
| features.FacileBiocDataStore | Source code |
| fetch_assay_data.FacileBiocDataStore | Source code |
| fetch_assay_data.FacileDESeqDataSet | Source code |
| fetch_custom_sample_covariates.FacileBiocDataStore | Source code |
| fetch_sample_covariates.FacileBiocDataStore | Source code |
| filter_samples.FacileBiocDataStore | Source code |
| ifacile | Source code |
| ifacile.FacileBiocDataStore | Source code |
| name.FacileBiocDataStore | Source code |
| organism.FacileBiocDataStore | Source code |
| pdata | Source code |
| pdata.DESeqDataSet | Source code |
| pdata.DGEList | Source code |
| pdata.EList | Source code |
| pdata.ExpressionSet | Source code |
| pdata.MultiAssayExperiment | Source code |
| pdata.SingleCellExperiment | Source code |
| pdata.SummarizedExperiment | Source code |
| reexports | Man page |
| reqpkg | Source code |
| samples.FacileBiocDataStore | Source code |
| tidy | Man page |
