Files in faustovrz/pglipid
Highland maize phosphoglycerolipid analysis
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/config.R
R/corncyc.R
R/gene_name.R
R/genome.R
R/kegg.R
R/make_data.R
R/pipe.R
R/read_col.R
R/read_dat.R
R/resample.R
R/sysdata.rda
R/upset_blue.R
R/zzz.R
README.md
data_raw/configure.R
inst/config.yaml
inst/extdata/output/AN_PBE_bg_genes.csv
inst/extdata/output/AN_PBE_outlier_genes.csv
inst/extdata/output/Figure2_A.pdf
inst/extdata/output/Figure2_A_SET_style.pdf
inst/extdata/output/GH_PBE_bg_genes.csv
inst/extdata/output/GH_PBE_outlier_genes.csv
inst/extdata/output/MH_PBE_bg_genes.csv
inst/extdata/output/MH_PBE_outlier_genes.csv
inst/extdata/output/US_PBE_bg_genes.csv
inst/extdata/output/US_PBE_outlier_genes.csv
inst/extdata/output/pbe_outlier_summary.csv
inst/extdata/output/pglipid_candidates.csv
inst/extdata/output/zma00561_expanded_cyc.csv
inst/extdata/output/zma00564_expanded_cyc.csv
man/add_transcript_version.Rd
man/drop_transcript_suffix.Rd
man/pipe.Rd
man/read_col.Rd
man/read_dat.Rd
pglipid.Rproj
scripts/1_get_gplipid_genes.R
scripts/2_get_PBE_outlier_genes.R
scripts/3_test_overrepresented_pathways.R
scripts/4_plot_PBE_pathway_outliers.R
scripts/5_resample_PCAdapt.R
scripts/kegg_phospholipids.R
