Man pages for fkeck/diatobc
Bioinformatic toolbox for my projects
| aliview | AliView: DNA sequences viewer |
| cleanID8 | Clean Database IDs from sequence names |
| cleanTaxa | Clean taxonomic names |
| countBC | Count similar barcodes |
| diatobc | diatobc |
| diatoms.seq | Diatoms genetic sequences |
| diatoms.tree | Diatoms Phylogeny |
| extendGraphClust | Extend clusters to new species using a phylogenetic tree |
| insertBC | Insert barcodes in an alignment |
| IPSP68 | Diatoms IPS-P68 index |
| jplaceExpand | Expanded '.jplace' files. |
| mafft2 | Interface with MAFFT |
| one_seq_one_spec | Keep on sequence per species |
| pathd8 | Tree relative datation with PATHd8 |
| raxmlBackbone | RAxML phylogeny with backbone tree. |
| raxmlPart | Partitions for RAxML |
| seaview | SeaView: DNA sequences and phylogenetic tree viewer |
