API for franciscorichter/emphasisLD
EMPHASIS Lineages Dependence Diversification models
| Global functions | |
|---|---|
| AIC_llik | Source code |
| AICw | Source code |
| GPD | Source code |
| MC_augmentation | Source code |
| M_step | Source code |
| PDTT_plot | Source code |
| Q_approx | Source code |
| corr_pars | Source code |
| draw_allocation | Source code |
| draw_allocation_full | Source code |
| draw_event_time | Source code |
| draw_speciation | Source code |
| em_r | Source code |
| emphasis | Man page |
| emphasisLD | Source code |
| emphasis_diagnostics | Source code |
| etree2phylo | Source code |
| expectedLTT | Man page |
| extend_tree | Source code |
| extinction_rate | Source code |
| foo | Source code |
| get_contributing_trees | Source code |
| get_extant | Source code |
| get_required_sampling_size | Source code |
| get_time | Source code |
| get_weights | Source code |
| intensity | Source code |
| intensity_missing | Source code |
| lambda.ldpd1 | Source code |
| lambda.ldpd2 | Source code |
| lambda.rpd1 | Source code |
| lambda.rpd5c | Source code |
| loglik.tree | Man page Source code |
| ltt_stat | Source code |
| mcEM | Man page Source code |
| mu.constant | Source code |
| n_for_all_bt | Source code |
| n_from_time | Source code |
| n_spec | Source code |
| n_spec_r | Source code |
| newick | Source code |
| nh_rate | Source code |
| phylo2emph | Source code |
| phylo2etree | Source code |
| phylo2vectors | Man page |
| phylodiversity | Source code |
| plot.etree | Source code |
| plot_multi_histogram | Source code |
| rate_at_bt | Source code |
| sample_size_determination | Source code |
| sample_tree | Source code |
| sample_tree_full | Source code |
| sampling_prob | Source code |
| simulation_analysis | Source code |
| speciation_rate | Source code |
| sum_of_rates | Source code |
| transf | Source code |
| vectors2phylo | Man page |
