Man pages for freezecoder/vcloudetl
Genomics variants database system in NoSQL Elasticsearch
| check_http_code_throw_error | HTTP response error handling. |
| cleaned_field_names | Sanitise column names. |
| create_bulk_upload_file | Create Bulk API data file. |
| create_metadata | Create Bulk API metadata. |
| deleteVariants | Title |
| elastic_version | Elasticsearch version |
| extract_query_results | Elasticsearch HTTP response data extraction functions. |
| from_size_search | Execute query with from-size search API. |
| getSNVobject | Make a SNV variant object from the returned variant data... |
| getSourceVariantFiles | Title |
| getVariants | Retrieve variants from the database |
| index_bulk_dataframe | Index data frame with Elasticsearch Bulk API |
| loadVariantBulk | Insert data from a file/cloud path into ES store |
| scroll_search | Execute a query with the scroll-search API. |
| valid_connection | Validate healthy Elasticsearch connection. |
| valid_json | Valid JSON string predicate function |
