Files in gavinmdouglas/POMS
Phylogenetic Organization of Metagenomic Signals
.aspell/defaults.R
gavinmdouglas/POMS documentation built on Jan. 11, 2023, 6:37 a.m.
.aspell/exclude.rds
DESCRIPTION
NAMESPACE
R/balances.R
R/enriched_func.R
R/phylo_regression.R
R/phylogenize_modified.R
R/pipeline.R
R/preprocess.R
R/wilcoxon.R
README.md
inst/CITATION
man/POMS_pipeline.Rd
man/abun_isometric_log_ratios.Rd
man/compute_node_balances.Rd
man/filter_rare_table_cols.Rd
man/genome_content_phylo_regress.Rd
man/images/ggtree_ex1.png
man/images/ggtree_ex2.png
man/images/logo_rectangular.png
man/node_taxa.Rd
man/phylolm_summary.Rd
man/prep_func_node_info.Rd
man/prevalence_norm_logit.Rd
man/specificity_scores.Rd
man/subset_by_col_and_filt.Rd
tests/example_files/ex_func.tsv.gz
tests/example_files/ex_group1.txt.gz
tests/example_files/ex_group2.txt.gz
tests/example_files/ex_taxa_abun.tsv.gz
tests/example_files/ex_taxa_labels.tsv.gz
tests/example_files/ex_tree.newick
tests/testthat.R
tests/testthat/helper_input_files.R
tests/testthat/test_calc_balances.R
tests/testthat/test_node_taxa.R
tests/testthat/test_phylo_regress.R
tests/testthat/test_pipeline.R
tests/testthat/test_preprocess.R
