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01-separating.Rmd 02-structured_data.Rmd 03-tidy_data.Rmd 04-designing_templates.Rmd 05-example_tidy.Rmd 06-project_directory.Rmd 07-create_project.Rmd 08-example_project.Rmd 09-version_control.Rmd 10-collaborate_vc.Rmd 11-use_git_github.Rmd 12-scripted_preprocessing.Rmd 13-preprocessing_tools.Rmd 14-intro_scripted_preprocess.Rmd 15-tips_on_repro_code.Rmd 16-tidyverse_tools.Rmd 17-complex_data_preprocess.Rmd 18-preprocess-protocol.Rmd 19-rmarkdown_protocol.Rmd 20-example_protocol.Rmd

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R/clean_raw_data.R R/hurricane_maria.R R/shipwreck_example.R README.md

_bookdown.yml

_build.sh

_output.yml

book.bib

chicago-fullnote-bibliography-16th-edition.csl

data/Re__R25_files (1)/MGJ020-5 Lung Bar dot plot.pdf

data/Re__R25_files (1)/siRNA RX in CHEMO RX mice.docx

data/bactcountr_example_data/CFU_data.rda

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data/bactcountr_example_data/figures/bacteria_plate.JPG

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data/bactcountr_example_data/processed_cfu_estimates.csv

data/growth_curve_data_in_excel (1)/Example_report.Rmd data/growth_curve_data_in_excel (1)/Example_report.pdf

data/growth_curve_data_in_excel (1)/excel sheet explained_GR_072419.docx

data/growth_curve_data_in_excel (1)/growth curve data_GR.xls

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figures/arranging_columns.png

figures/blogdownexample.png

figures/complex_data_structure.png

figures/create_new_project.png

figures/dataframe.png

figures/demarcating_code.png

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figures/existing_blackboxes.pptx

figures/extra_github_figures.pptx

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improve_repro.Rproj

improve_repro.log

index.Rmd

misc_notes/Notes_2.1.txt

misc_notes/Notes_2.9.txt

misc_notes/project_gitignore.txt

misc_notes/project_mkdir.sh

now.json

packages.bib

preamble.tex

skeleton.bib

style.css

toc.css

geanders/improve_repro documentation built on Sept. 7, 2024, 7:28 a.m.

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