Man pages for gibbslab/coexnet
coexnet: An R package to build CO-EXpression NETworks from Microarray Data
| affy | Greene-5P01NS017771-220003: Microarray expression experiment... |
| CCP | Finding Common Connection Pattern between different networks. |
| cofVar | Calculating the coefficient of variation for expression... |
| createNet | Creating a co-expression network from expression matrix. |
| difExprs | Differential expression analysis using two different methods. |
| exprMat | Calculate the expression matrix from the raw expression data. |
| findThreshold | Find the threshold value to create a co-expression network |
| geneSymbol | Create a table relating probesets with genes |
| getAffy | Charge and create an AffyBatch object |
| getInfo | Download raw expression data from GEO DataSet |
| info | Table with the relation between the probesets and the... |
| net1 | Simulated network #1 |
| net2 | Simulated network #2 |
| ppiNet | Create a protein-protein interaction network |
| sharedComponents | Finding shared components between diferent networks. |
